RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 NPIPA5A0A0B4J1W7 369 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 NPIPA7E9PJI5 369 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 TNFSF14O43557 240 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 EGFP01133 1207 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 HLA-DPB1P04440 258 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 CSF3P09919 207 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 NPIPA8P0DM63 369 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 FUT1P19526 365 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 NT5EP21589 574 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 SSTR4P31391 388 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 GPR18Q14330 331 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 ZNF628Q5EBL2 1059 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 B3GLCTQ6Y288 498 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 COX18Q8N8Q8 333 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 OR51G2Q8NGK0 314 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 RERGQ96A58 199 aaPredicted RBP12.24□□□□□ -0.45
LDLR-203ENST00000535915 PRSS27Q9BQR3 290 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 SLC22A4Q9H015 551 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 OR52D1Q9H346 318 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 NEK6Q9HC98 313 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 ZNF221Q9UK13 617 aa12.24□□□□□ -0.45
LDLR-203ENST00000535915 C19orf53Q9UNZ5 99 aaPredicted RBP12.24□□□□□ -0.45
LDLR-203ENST00000535915 MRPS2Q9Y399 296 aaKnown RBP12.24□□□□□ -0.45
LDLR-203ENST00000535915 TRAPPC13A5PLN9 417 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 UNC119BA6NIH7 251 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 POLR1CO15160 346 aaPredicted RBP12.23□□□□□ -0.45
LDLR-203ENST00000535915 STX11O75558 287 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 IGHA1P01876 353 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 DBIP07108 87 aaKnown RBP12.23□□□□□ -0.45
LDLR-203ENST00000535915 PAICSP22234 425 aaKnown RBP12.23□□□□□ -0.45
LDLR-203ENST00000535915 ACSL1P33121 698 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 INSL4Q14641 139 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 MRPL2Q5T653 305 aaKnown RBP12.23□□□□□ -0.45
LDLR-203ENST00000535915 PLBD1Q6P4A8 553 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 SMARCD3Q6STE5 483 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 KIAA1324Q6UXG2 1013 aaKnown RBP12.23□□□□□ -0.45
LDLR-203ENST00000535915 PRSS41Q7RTY9 318 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 MARCH9Q86YJ5 346 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 KLBQ86Z14 1044 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 SHISA5Q8N114 240 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 SIRT6Q8N6T7 355 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 OR52L1Q8NGH7 329 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 FANK1Q8TC84 345 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 ASB12Q8WXK4 309 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 ZFYVE21Q9BQ24 234 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 ZNF649Q9BS31 505 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 ZNF350Q9GZX5 532 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 FBXO34Q9NWN3 711 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 SCML1Q9UN30 329 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 TDRD6O60522 2096 aaKnown RBP12.23□□□□□ -0.45
LDLR-203ENST00000535915 GABRPO00591 440 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 PEX12O00623 359 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 APBB3O95704 486 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 HTR2AP28223 471 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 PPP3R1P63098 170 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 ASAH1Q13510 395 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 OR1Q1Q15612 314 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 TMEM31Q5JXX7 168 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 SLC35F1Q5T1Q4 408 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 ATP6V1C2Q8NEY4 427 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 OR6F1Q8NGZ6 308 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 OR52N1Q8NH53 320 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 PFN4Q8NHR9 129 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 NEIL3Q8TAT5 605 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 CD180Q99467 661 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 LMAN2LQ9H0V9 348 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 MMP28Q9H239 520 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 PILRAQ9UKJ1 303 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 SPACA6W5XKT8 324 aa12.23□□□□□ -0.45
LDLR-203ENST00000535915 LRP4O75096 1905 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 A6NCN8 305 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 EPOPA6NHQ4 379 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 CD8B2A6NJW9 211 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 CENPBD1B2RD01 187 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 H0YGG7 62 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 RGS13O14921 159 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 FGF17O60258 216 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 NCR1O76036 304 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 ZGLP1P0C6A0 271 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 CD8BP10966 210 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 IFI30P13284 250 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 PVRP15151 417 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 BMP7P18075 431 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 SRP54P61011 504 aaKnown RBP12.22□□□□□ -0.45
LDLR-203ENST00000535915 ARF3P61204 181 aaPredicted RBP12.22□□□□□ -0.45
LDLR-203ENST00000535915 FHL5Q5TD97 284 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 FIGNL1Q6PIW4 674 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 WDR88Q6ZMY6 472 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 ARIH2OSQ8N7S6 290 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 TMEM239Q8WW34 195 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 FAM3CQ92520 227 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 MED20Q9H944 212 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 ATP13A2Q9NQ11 1180 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 C20orf141Q9NUB4 165 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 SIDT1Q9NXL6 827 aaKnown RBP12.22□□□□□ -0.45
LDLR-203ENST00000535915 CCDC182A6NF36 153 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 NID1P14543 1247 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 MAKP20794 623 aa12.22□□□□□ -0.45
LDLR-203ENST00000535915 HNRNPA2B1P22626 353 aaKnown RBP12.22□□□□□ -0.45
LDLR-203ENST00000535915 ACSM1Q08AH1 577 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms