RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 DUSP26Q9BV47 211 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ZNF416Q9BWM5 594 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TSSK6Q9BXA6 273 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SPRTNQ9H040 489 aaPredicted RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 BTBD1Q9H0C5 482 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 MIXL1Q9H2W2 232 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 OR51J1Q9H342 316 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SERHL2Q9H4I8 314 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 CWH43Q9H720 699 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 PPP1R3EQ9H7J1 279 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ZNF304Q9HCX3 659 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 IFT46Q9NQC8 304 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.16□□□□□ -1.42
USP28-202ENST00000535607 ZSCAN32Q9NX65 697 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 KCTD5Q9NXV2 234 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 COMMD3Q9UBI1 195 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 PRG3Q9Y2Y8 225 aaPredicted RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 SPIN1Q9Y657 262 aaPredicted RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 CDH10Q9Y6N8 788 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ENPP4Q9Y6X5 453 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TNRC18O15417 2968 aaPredicted RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 A0A1W2PPC1 479 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 MGAT4DA6NG13 374 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 C5orf58C9J3I9 102 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 H3BN98 237 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 TRIM77I1YAP6 450 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 QSOX1O00391 747 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 RNASET2O00584 256 aaKnown RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 SMAD6O43541 496 aaKnown RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 CHP2O43745 196 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SSNA1O43805 119 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 AKAP8O43823 692 aaKnown RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 LDOC1O95751 146 aaPredicted RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 GUCA1CO95843 209 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 PDYNP01213 254 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 RB1P06400 928 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 HOXD4P09016 255 aaPredicted RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 UGT2B7P16662 529 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 AMD1P17707 334 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 CBLP22681 906 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 KELP23276 732 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 DNASE1P24855 282 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 POU1F1P28069 291 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 PTPN6P29350 595 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SLC6A1P30531 599 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 APOBEC3AP31941 199 aaPredicted RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 RORAP35398 523 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SOX3P41225 446 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 CRATP43155 626 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 XCR1P46094 333 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 RGS19P49795 217 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 GATMP50440 423 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ZNF81P51508 661 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 XKP51811 444 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SUMO3P55854 103 aaPredicted RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 AP3S2P59780 193 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 MXD1Q05195 221 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ACSM2AQ08AH3 577 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 EXOSC2Q13868 293 aaKnown RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 SCARB2Q14108 478 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ARHGEF7Q14155 803 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 FGFBP1Q14512 234 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 RGNQ15493 299 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 RAB30Q15771 203 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 LEXMQ3ZCV2 418 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 GPR33Q49SQ1 333 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SLC39A12Q504Y0 691 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SOWAHCQ53LP3 525 aaPredicted RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 FBXO48Q5FWF7 155 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 CRB2Q5IJ48 1285 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 CTSL3PQ5NE16 218 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 DCST1Q5T197 706 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 LIPKQ5VXJ0 399 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 LIPJQ5W064 366 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 FRG2Q64ET8 278 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ACSM2BQ68CK6 577 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 NADSYN1Q6IA69 706 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 C22orf42Q6IC83 251 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 PYHIN1Q6K0P9 492 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 CDC73Q6P1J9 531 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 FAM198BQ6UWH4 519 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 Q6ZRM9 215 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 RASSF6Q6ZTQ3 369 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 RASGRP3Q8IV61 690 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 TIGD4Q8IY51 512 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 L3MBTL4Q8NA19 623 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 OR4M1Q8NGD0 313 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 OR10Q1Q8NGQ4 319 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ADAMTS14Q8WXS8 1223 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 ESAMQ96AP7 390 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 FCRL1Q96LA6 429 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 COQ10AQ96MF6 247 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SLC38A2Q96QD8 506 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 FRG2BQ96QU4 278 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 OR4K3Q96R72 315 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 SOSTQ9BQB4 213 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 PAAF1Q9BRP4 392 aa6.15□□□□□ -1.42
USP28-202ENST00000535607 DPCDQ9BVM2 203 aaPredicted RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 POLDIP3Q9BY77 421 aaKnown RBP6.15□□□□□ -1.42
USP28-202ENST00000535607 ACPTQ9BZG2 426 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms