RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 PTGES2Q9H7Z7 377 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 SAR1AQ9NR31 198 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 LIPT1Q9Y234 373 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 RPH3AQ9Y2J0 694 aaPredicted RBP20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 WDR45Q9Y484 360 aa20.61■□□□□ 0.89
SFSWAP-204ENST00000535399 FIGNL2A6NMB9 653 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 CLIC1O00299 241 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 OIP5O43482 229 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 GMFGO60234 142 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 TNFRSF21O75509 655 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 UGT2B17O75795 530 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 H6PDO95479 791 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 CHRM4P08173 479 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 HK1P19367 917 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 TCEA1P23193 301 aaKnown RBP20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 ACVR2AP27037 513 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 CRATP43155 626 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 CHRNEQ04844 493 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 MAPK11Q15759 364 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 MAPK14Q16539 360 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 ZNF630Q2M218 657 aaPredicted RBP20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 GPAT3Q53EU6 434 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 RTL6Q6ICC9 239 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 ARSKQ6UWY0 536 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 DLEU7Q6UYE1 221 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 EID3Q8N140 333 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 WDYHV1Q96HA8 205 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 SH3YL1Q96HL8 342 aaPredicted RBP20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 SFXN2Q96NB2 322 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 PRDM14Q9GZV8 571 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 SLC38A1Q9H2H9 487 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 VAPAQ9P0L0 249 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 LEF1Q9UJU2 399 aaPredicted RBP20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 FAM215AQ9Y5M1 114 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 GMEB1Q9Y692 573 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 PTPN13Q12923 2485 aa20.6■□□□□ 0.89
SFSWAP-204ENST00000535399 MED12Q93074 2177 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 SERINC4A6NH21 518 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 H3BNH8 94 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 WDR1O75083 606 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 SNRPB2P08579 225 aaKnown RBP20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 GCKP35557 465 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 SEC24CP53992 1094 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 RGNQ15493 299 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 TMEM44Q2T9K0 475 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 LRRC74BQ6ZQY2 392 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 RETREG3Q86VR2 466 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 ULK2Q8IYT8 1036 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 ZNF619Q8N2I2 560 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 ZNF614Q8N883 585 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 B4GALNT2Q8NHY0 566 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 ITLN2Q8WWU7 325 aaPredicted RBP20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 ZG16BQ96DA0 208 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 MRGBPQ9NV56 204 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 NDUFAF1Q9Y375 327 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 FREM3P0C091 2139 aa20.59■□□□□ 0.89
SFSWAP-204ENST00000535399 HCRTR2O43614 444 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 GABRA1P14867 456 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 CHMP24386 653 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 LSP1P33241 339 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 DSTNP60981 165 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 HPCAP84074 193 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 ZNF117Q03924 483 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 KLF10Q13118 480 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 NDUFAF6Q330K2 333 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 GLYR1Q49A26 553 aaPredicted RBP20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 AAGABQ6PD74 315 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 CBLN3Q6UW01 205 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 RPTNQ6XPR3 784 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 DPP10Q8N608 796 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 OIT3Q8WWZ8 545 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 RUBCNLQ9H714 662 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 MED17Q9NVC6 651 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 ALKBH4Q9NXW9 302 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 P2RX2Q9UBL9 471 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 ICAM5Q9UMF0 924 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 CARD8Q9Y2G2 431 aa20.58■□□□□ 0.89
SFSWAP-204ENST00000535399 AHRRA9YTQ3 701 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 GTPBP1O00178 669 aaKnown RBP20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 HOXD4P09016 255 aaPredicted RBP20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 TFPTP0C1Z6 253 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 NR2F1P10589 423 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 BMP2P12643 396 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 CPN1P15169 458 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 STARP49675 285 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 LHX2P50458 406 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 C1orf185Q5T7R7 199 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 RAET1LQ5VY80 246 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 TMEM211Q6ICI0 200 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 PM20D2Q8IYS1 436 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 OR5M1Q8NGP8 315 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 RAD21L1Q9H4I0 556 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 CAMK2AQ9UQM7 478 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 L3MBTL1Q9Y468 752 aa20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 SPTBN1Q01082 2364 aaKnown RBP20.57■□□□□ 0.88
SFSWAP-204ENST00000535399 HECTD1Q9ULT8 2610 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 A0A087WZY1 265 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 OR2M5A3KFT3 312 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 SHISA8B8ZZ34 492 aa20.56■□□□□ 0.88
SFSWAP-204ENST00000535399 ANGPT2O15123 496 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms