RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FOXA2Q9Y261 457 aaPredicted RBP0.12□□□□□ -2.39
COPB1-212ENST00000534771 UGT2A1Q9Y4X1 527 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 PTPRUQ92729 1446 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 TTC21BQ7Z4L5 1316 aa0.12□□□□□ -2.39
COPB1-212ENST00000534771 METP08581 1390 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 LRIT2A6NDA9 550 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 RBMY1BA6NDE4 496 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 RBMY1EA6NEQ0 496 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 SAGE2PA6NJ88 616 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 ZNF705GA8MUZ8 300 aaPredicted RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 K7EM74 188 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 TLR4O00206 839 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 WDR46O15213 610 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 ATP9AO75110 1047 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 ZNF780AO75290 641 aaPredicted RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 VAMP5O95183 116 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 CHRNGP07510 517 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 RBMY1DP0C7P1 496 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 RBMY1A1P0DJD3 496 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 RBMY1CP0DJD4 496 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 TCN2P20062 427 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 CCND3P30281 292 aaPredicted RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 FRKP42685 505 aaPredicted RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 TNFSF10P50591 281 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 CAPZA1P52907 286 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 LIM2P55344 173 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 VLDLRP98155 873 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 PSG5Q15238 335 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 RBMY1FQ15415 496 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 NRF1Q16656 503 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 KYNUQ16719 465 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 CFAP58Q5T655 872 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 SPATA1Q5VX52 437 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 SAXO2Q658L1 398 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 HCP5Q6MZN7 132 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 SMARCD3Q6STE5 483 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 CD164L2Q6UWJ8 174 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 BHLHA15Q7RTS1 189 aaPredicted RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 PRSS41Q7RTY9 318 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 CAMK2N1Q7Z7J9 78 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 SERPINA9Q86WD7 417 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 KLHDC8AQ8IYD2 350 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 RGP1Q92546 391 aaPredicted RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 HAS2Q92819 552 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 MRPL53Q96EL3 112 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 CDKN2AIPNLQ96HQ2 116 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 RPGRIP1Q96KN7 1286 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 RNF157Q96PX1 679 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 ACCSQ96QU6 501 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 KCNA7Q96RP8 456 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 NTMT1Q9BV86 223 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 SRXN1Q9BYN0 137 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 CHIAQ9BZP6 476 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 OR11A1Q9GZK7 315 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 ANKRD2Q9GZV1 360 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 TMEM245Q9H330 911 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 CDC42EP4Q9H3Q1 356 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 NOX3Q9HBY0 568 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 PFDN4Q9NQP4 134 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 SLC25A37Q9NYZ2 338 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 DEC1Q9P2X7 70 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 OR12D3Q9UGF7 316 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 PURGQ9UJV8 347 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 CCL27Q9Y4X3 112 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 MAB21L2Q9Y586 359 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 SORL1Q92673 2214 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 PCNX2A6NKB5 2137 aa0.11□□□□□ -2.39
COPB1-212ENST00000534771 SYNE2Q8WXH0 6885 aaKnown RBP0.11□□□□□ -2.39
COPB1-212ENST00000534771 CARMIL3Q8ND23 1372 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 COL22A1Q8NFW1 1626 aaPredicted RBP0.1□□□□□ -2.39
COPB1-212ENST00000534771 A8MUU9 505 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 A8MXE2 369 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 SLC28A1O00337 649 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 CHEK1O14757 476 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 AHCYL1O43865 530 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 GFPT2O94808 682 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 ZFYP08048 801 aaPredicted RBP0.1□□□□□ -2.39
COPB1-212ENST00000534771 ADRA2AP08913 450 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 PRB4P10163 310 aaPredicted RBP0.1□□□□□ -2.39
COPB1-212ENST00000534771 PSMC3P17980 439 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 FCARP24071 287 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 PTAFRP25105 342 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 NPY4RP50391 375 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 GEMP55040 296 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 RND3P61587 244 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 HERV-K104P63124 156 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 FLI1Q01543 452 aaPredicted RBP0.1□□□□□ -2.39
COPB1-212ENST00000534771 CNTN2Q02246 1040 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 CALD1Q05682 793 aaKnown RBP0.1□□□□□ -2.39
COPB1-212ENST00000534771 SLC10A7Q0GE19 358 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 ST3GAL3Q11203 375 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 BAMBIQ13145 260 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 KARSQ15046 597 aaKnown RBP0.1□□□□□ -2.39
COPB1-212ENST00000534771 PKN2Q16513 984 aaKnown RBP0.1□□□□□ -2.39
COPB1-212ENST00000534771 TMEM183BQ1AE95 376 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 KRBOX4Q5JUW0 171 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 C1orf146Q5VVC0 180 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 PODNL1Q6PEZ8 512 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 STAC2Q6ZMT1 411 aa0.1□□□□□ -2.39
COPB1-212ENST00000534771 ARCQ7LC44 396 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms