RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 CDC73Q6P1J9 531 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 VWA1Q6PCB0 445 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 BTLAQ7Z6A9 289 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 KRTCAP2Q8N6L1 136 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 METTL25Q8N6Q8 603 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 CHDHQ8NE62 594 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-211ENST00000533492 B4GALNT2Q8NHY0 566 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 ACTRT2Q8TDY3 377 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 NUDT8Q8WV74 236 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 ZBTB8AQ96BR9 441 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 SLC39A3Q9BRY0 314 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 DUSP26Q9BV47 211 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 BHLHE41Q9C0J9 482 aaPredicted RBP13.9□□□□□ -0.18
CPSF1-211ENST00000533492 HOXD1Q9GZZ0 328 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 CXorf36Q9H7Y0 433 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 RNF122Q9H9V4 155 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 GIN1Q9NXP7 522 aa13.9□□□□□ -0.18
CPSF1-211ENST00000533492 A0A1W2PQD3 144 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 H3BNH8 94 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 BIRC5O15392 142 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 ITM2AO43736 263 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 SERPINE1P05121 402 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 G6PDP11413 515 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 FCGR2AP12318 317 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 ABCE1P61221 599 aaKnown RBP13.89□□□□□ -0.19
CPSF1-211ENST00000533492 EMX2Q04743 252 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF844Q08AG5 666 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 POU4F3Q15319 338 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 PDCD2Q16342 344 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-211ENST00000533492 PGS1Q32NB8 556 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 EXOSC6Q5RKV6 272 aaKnown RBP13.89□□□□□ -0.19
CPSF1-211ENST00000533492 BHLHB9Q6PI77 547 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 GTPBP8Q8N3Z3 284 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF527Q8NB42 609 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 PSMA8Q8TAA3 256 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 PHOSPHO1Q8TCT1 267 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 MOAP1Q96BY2 351 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 PPP1R36Q96LQ0 422 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 OPN3Q9H1Y3 402 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-211ENST00000533492 NEUROD4Q9HD90 331 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 MED17Q9NVC6 651 aa13.89□□□□□ -0.19
CPSF1-211ENST00000533492 PAQR5Q9NXK6 330 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-211ENST00000533492 NOP53Q9NZM5 478 aaKnown RBP13.89□□□□□ -0.19
CPSF1-211ENST00000533492 PRRC2AP48634 2157 aaKnown RBP13.89□□□□□ -0.19
CPSF1-211ENST00000533492 GTPBP1O00178 669 aaKnown RBP13.88□□□□□ -0.19
CPSF1-211ENST00000533492 TM9SF1O15321 606 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 SYNGR4O95473 234 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 NUDT14O95848 222 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 PLGP00747 810 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-211ENST00000533492 OPN1LWP04000 364 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 MYZAPP0CAP1 466 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 POU2F1P14859 743 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 ME2P23368 584 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 SOAT1P35610 550 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 CD79BP40259 229 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 CLDN8P56748 225 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 RAC1P63000 192 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 KEAP1Q14145 624 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 SMU1Q2TAY7 513 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 PLPPR5Q32ZL2 321 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 DCST2Q5T1A1 773 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 PDSS1Q5T2R2 415 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 CAMKMTQ7Z624 323 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 MTERF4Q7Z6M4 381 aaKnown RBP13.88□□□□□ -0.19
CPSF1-211ENST00000533492 GGNQ86UU5 652 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 RIMKLAQ8IXN7 391 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF781Q8N8C0 355 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 SFXN5Q8TD22 340 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 RNF145Q96MT1 663 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 ZIM3Q96PE6 472 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF395Q9H8N7 513 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-211ENST00000533492 SSU72Q9NP77 194 aaKnown RBP13.88□□□□□ -0.19
CPSF1-211ENST00000533492 KCNK9Q9NPC2 374 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 GPATCH2Q9NW75 528 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 ELOVL5Q9NYP7 299 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 MCTS1Q9ULC4 181 aaKnown RBP13.88□□□□□ -0.19
CPSF1-211ENST00000533492 PCDHGB4Q9UN71 923 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 PROCRQ9UNN8 238 aa13.88□□□□□ -0.19
CPSF1-211ENST00000533492 ITPR3Q14573 2671 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 AQP8O94778 261 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 SNUPNO95149 360 aaKnown RBP13.87□□□□□ -0.19
CPSF1-211ENST00000533492 RAF1P04049 648 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 HRGP04196 525 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 CD8BP10966 210 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 EIF1P41567 113 aaKnown RBP13.87□□□□□ -0.19
CPSF1-211ENST00000533492 SLC1A6P48664 564 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 PCYT1AP49585 367 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 RPL14P50914 215 aaKnown RBP13.87□□□□□ -0.19
CPSF1-211ENST00000533492 CTBP2P56545 445 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 HBA1P69905 142 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 CD226Q15762 336 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 CEP85LQ5SZL2 805 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF474Q6S9Z5 364 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-211ENST00000533492 PAMR1Q6UXH9 720 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 ESPNLQ6ZVH7 1005 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 FAM214BQ7L5A3 538 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 KIRREL3Q8IZU9 778 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF614Q8N883 585 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 ZNF610Q8N9Z0 462 aa13.87□□□□□ -0.19
CPSF1-211ENST00000533492 OR10D3Q8NH80 312 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms