RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 ZNF385BQ569K4 471 aa20.47■□□□□ 0.87
PKP3-210ENST00000533249 FIGNL1Q6PIW4 674 aa20.47■□□□□ 0.87
PKP3-210ENST00000533249 WDR75Q8IWA0 830 aaKnown RBP20.47■□□□□ 0.87
PKP3-210ENST00000533249 GMPPAQ96IJ6 420 aaPredicted RBP20.47■□□□□ 0.87
PKP3-210ENST00000533249 LRTM1Q9HBL6 345 aa20.47■□□□□ 0.87
PKP3-210ENST00000533249 MCTS1Q9ULC4 181 aaKnown RBP20.47■□□□□ 0.87
PKP3-210ENST00000533249 ALG1L2C9J202 215 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 CXCL13O43927 109 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 SYNGR4O95473 234 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 ACP2P11117 423 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 PCSK6P29122 969 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 MAP3K8P41279 467 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.46■□□□□ 0.87
PKP3-210ENST00000533249 BEX5Q5H9J7 111 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 PLEKHM3Q6ZWE6 761 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 ANKRD42Q8N9B4 389 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 CDRT4Q8N9R6 151 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 NUP43Q8NFH3 380 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 CEP70Q8NHQ1 597 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 ZFP28Q8NHY6 868 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 PPCDCQ96CD2 204 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 SH3YL1Q96HL8 342 aaPredicted RBP20.46■□□□□ 0.87
PKP3-210ENST00000533249 C12orf65Q9H3J6 166 aaKnown RBP20.46■□□□□ 0.87
PKP3-210ENST00000533249 TMEM185BQ9H7F4 350 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 C1orf109Q9NX04 203 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 MKS1Q9NXB0 559 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 FIS1Q9Y3D6 152 aa20.46■□□□□ 0.87
PKP3-210ENST00000533249 JMJD1CQ15652 2540 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 TLN2Q9Y4G6 2542 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 A0A087WZY1 265 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 A0A1W2PRB8 838 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 KLF4O43474 513 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 PLIN3O60664 434 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 SS18L1O75177 396 aaPredicted RBP20.45■□□□□ 0.86
PKP3-210ENST00000533249 PPP3CBP16298 524 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 PTH2RP49190 550 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 MANFP55145 182 aaKnown RBP20.45■□□□□ 0.86
PKP3-210ENST00000533249 DNAJB13P59910 316 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 CTU2Q2VPK5 515 aaKnown RBP20.45■□□□□ 0.86
PKP3-210ENST00000533249 CCDC153Q494R4 210 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 STAC2Q6ZMT1 411 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 ZAR1Q86SH2 424 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 GTPBP8Q8N3Z3 284 aaPredicted RBP20.45■□□□□ 0.86
PKP3-210ENST00000533249 CLHC1Q8NHS4 586 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 TCP10LQ8TDR4 215 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 HOXB13Q92826 284 aaPredicted RBP20.45■□□□□ 0.86
PKP3-210ENST00000533249 OTUB1Q96FW1 271 aaPredicted RBP20.45■□□□□ 0.86
PKP3-210ENST00000533249 ADGRG7Q96K78 797 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 RNF145Q96MT1 663 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 TSSK3Q96PN8 268 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 MED17Q9NVC6 651 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 SH3BP4Q9P0V3 963 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 MID2Q9UJV3 735 aa20.45■□□□□ 0.86
PKP3-210ENST00000533249 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 TMEM120BA0PK00 339 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 SLC28A1O00337 649 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 TNFSF11O14788 317 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 RGS14O43566 566 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 PRPH2P23942 346 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 ZNF41P51814 821 aaPredicted RBP20.44■□□□□ 0.86
PKP3-210ENST00000533249 DUSP5Q16690 384 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 HHATQ5VTY9 493 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 ZNF704Q6ZNC4 412 aaPredicted RBP20.44■□□□□ 0.86
PKP3-210ENST00000533249 WFDC8Q8IUA0 241 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 ARFGAP2Q8N6H7 521 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 SLC16A11Q8NCK7 471 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 OR2V1Q8NHB1 315 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 GIMAP5Q96F15 307 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 ZBED6CLQ96FA7 236 aaPredicted RBP20.44■□□□□ 0.86
PKP3-210ENST00000533249 METTL2AQ96IZ6 378 aaKnown RBP20.44■□□□□ 0.86
PKP3-210ENST00000533249 MS4A4EQ96PG1 132 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 CCT7Q99832 543 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 PAIP2Q9BPZ3 127 aaKnown RBP20.44■□□□□ 0.86
PKP3-210ENST00000533249 GSX2Q9BZM3 304 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 REEP4Q9H6H4 257 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 FBXO34Q9NWN3 711 aa20.44■□□□□ 0.86
PKP3-210ENST00000533249 PAQR5Q9NXK6 330 aaPredicted RBP20.44■□□□□ 0.86
PKP3-210ENST00000533249 A0A0J9YW62 118 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 TM9SF1O15321 606 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 TYROBPO43914 113 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 KCNK2O95069 426 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 PLAUP00749 431 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 NGFRP08138 427 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 CPA3P15088 417 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 HPGDP15428 266 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 SDC1P18827 310 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 EFNA1P20827 205 aaPredicted RBP20.43■□□□□ 0.86
PKP3-210ENST00000533249 RAC1P63000 192 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 PLPPR5Q32ZL2 321 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 CPTPQ5TA50 214 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 ALKBH2Q6NS38 261 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 OR6Y1Q8NGX8 325 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 OR2T11Q8NH01 316 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 MGARPQ8TDB4 240 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 TMEM171Q8WVE6 324 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 ZBTB8AQ96BR9 441 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 PLPPR2Q96GM1 343 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 C16orf58Q96GQ5 468 aa20.43■□□□□ 0.86
PKP3-210ENST00000533249 ZNF764Q96H86 408 aaPredicted RBP20.43■□□□□ 0.86
PKP3-210ENST00000533249 KLHDC3Q9BQ90 382 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms