RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TNFRSF10DQ9UBN6 386 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 TINAGQ9UJW2 476 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 DKKL1Q9UK85 242 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 SLC6A5Q9Y345 797 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 HIVEP3Q5T1R4 2406 aa10.89□□□□□ -0.67
SSBP3-214ENST00000533209 NCKAP5O14513 1909 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 LRRK2Q5S007 2527 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 TRGV8A0A0C4DH27 118 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 SERINC4A6NH21 518 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 BBIP1A8MTZ0 92 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 NPIPA2E9PIF3 369 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 NPIPA3F8WFD2 350 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 FXYD1O00168 92 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 MRASO14807 208 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 HCRTR2O43614 444 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 GMFGO60234 142 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 SHOX2O60902 331 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 SEMA7AO75326 666 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 BCHEP06276 602 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 MSX1P28360 303 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 B3GALT5-AS1P59052 145 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF117Q03924 483 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 CRYZQ08257 329 aaKnown RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 CYLC2Q14093 348 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 SELPLGQ14242 412 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 CAPRIN1Q14444 709 aaKnown RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 GANABQ14697 944 aaKnown RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 ZNF630Q2M218 657 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 TRMT5Q32P41 509 aaKnown RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 NDUFAF6Q330K2 333 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 C4orf17Q53FE4 359 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 NHSL2Q5HYW2 709 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 VASNQ6EMK4 673 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 HMGN2P46Q86SG4 172 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 CD163Q86VB7 1156 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 DOLPP1Q86YN1 238 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 POU5F2Q8N7G0 328 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 OR14L1PQ8NHC6 308 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 PMM1Q92871 262 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 MAL2Q969L2 176 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 SARAFQ96BY9 339 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 C1GALT1C1Q96EU7 318 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 DTNBP1Q96EV8 351 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 SH3YL1Q96HL8 342 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 CCT8L2Q96SF2 557 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 TRIM8Q9BZR9 551 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 QRSL1Q9H0R6 528 aaKnown RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 PTGES2Q9H7Z7 377 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 MTHFD2LQ9H903 347 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 A4GALTQ9NPC4 353 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 CALML5Q9NZT1 146 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 ERRFI1Q9UJM3 462 aaPredicted RBP10.88□□□□□ -0.67
SSBP3-214ENST00000533209 ADAM21Q9UKJ8 722 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 ACAD8Q9UKU7 415 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 CORO2BQ9UQ03 480 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 CARD8Q9Y2G2 431 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 L3MBTL1Q9Y468 752 aa10.88□□□□□ -0.67
SSBP3-214ENST00000533209 DSPPQ9NZW4 1301 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 C15orf38-AP3S2A0A0A6YYH1 394 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 AGAP5A6NIR3 686 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 EVPLLA8MZ36 301 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 H3BNH8 94 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 GTPBP1O00178 669 aaKnown RBP10.87□□□□□ -0.67
SSBP3-214ENST00000533209 PRRG2O14669 202 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 BCKDKO14874 412 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 LRRTM2O43300 516 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 NPPAP01160 153 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 TPOP07202 933 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 ARAFP10398 606 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 UBL4AP11441 157 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 COX4I1P13073 169 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 BMP7P18075 431 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 HK1P19367 917 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 RPS4Y1P22090 263 aaKnown RBP10.87□□□□□ -0.67
SSBP3-214ENST00000533209 TCEA1P23193 301 aaKnown RBP10.87□□□□□ -0.67
SSBP3-214ENST00000533209 ADH7P40394 386 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 CRISP3P54108 245 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 GFRA1P56159 465 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 FGFBP1Q14512 234 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 ADRM1Q16186 407 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 MMEL1Q495T6 779 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 GXYLT1Q4G148 440 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 RPS26P11Q5JNZ5 115 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-214ENST00000533209 DCST1Q5T197 706 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 GCNT6Q5T4J0 391 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 CBLN3Q6UW01 205 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 ARSKQ6UWY0 536 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 FJX1Q86VR8 437 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 IFNEQ86WN2 208 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 OR5M9Q8NGP3 310 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 B4GALNT2Q8NHY0 566 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 RP9Q8TA86 221 aaKnown RBP10.87□□□□□ -0.67
SSBP3-214ENST00000533209 LRRC58Q96CX6 371 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 TMEM19Q96HH6 336 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 TIMP4Q99727 224 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 TREX2Q9BQ50 279 aaPredicted RBP10.87□□□□□ -0.67
SSBP3-214ENST00000533209 SLC39A3Q9BRY0 314 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 UGT2B28Q9BY64 529 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 PNPLA3Q9NST1 481 aa10.87□□□□□ -0.67
SSBP3-214ENST00000533209 SUCOQ9UBS9 1254 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms