RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 VSTM2BA6NLU5 285 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 L7N2F9 121 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 SYT5O00445 386 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 B3GALT4O96024 378 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 EN2P19622 333 aaPredicted RBP14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 MRPL2Q5T653 305 aaKnown RBP14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 CNIH2Q6PI25 160 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 OR5W2Q8NH69 310 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 SCGB3A2Q96PL1 93 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 FXYD6Q9H0Q3 95 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 TP63Q9H3D4 680 aaPredicted RBP14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 NT5DC2Q9H857 520 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 EVA1AQ9H8M9 152 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 DKKL1Q9UK85 242 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 GABARAPO95166 117 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 PTHP01270 115 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 PXNP49023 591 aaPredicted RBP14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 LAS2Q8IYD9 372 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 SDR9C7Q8NEX9 313 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 ACTR6Q9GZN1 396 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 TESQ9UGI8 421 aaKnown RBP14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 KLK4Q9Y5K2 254 aa14.35□□□□□ -0.11
PCDHA3-202ENST00000532566 TRAPPC6AO75865 159 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 PLGP00747 810 aaPredicted RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 ANXA3P12429 323 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 ELAVL4P26378 380 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 PSMA6P60900 246 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 DEFB133Q30KQ1 61 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 TP53I3Q53FA7 332 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 SLC48A1Q6P1K1 146 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 ZER1Q7Z7L7 766 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 ZNF283Q8N7M2 679 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 ASCC1Q8N9N2 400 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 MSLNLQ96KJ4 702 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 NOP16Q9Y3C1 178 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 ZNF208O43345 1280 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 PRKRAO75569 313 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 PRR35P0CG20 571 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 PKLRP30613 574 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 TSFMP43897 325 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 SLC6A8P48029 635 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 PDE7AQ13946 482 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 SYT6Q5T7P8 510 aaPredicted RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 COQ10AQ96MF6 247 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 SGPP1Q9BX95 441 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 B3GAT2Q9NPZ5 323 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 MEMO1Q9Y316 297 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 ZNF878C9JN71 531 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 FAM227AF5H4B4 570 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 ANKRD28O15084 1053 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 SRPX2O60687 465 aaPredicted RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 IL1AP01583 271 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 BCL6P41182 706 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 SLC22A8Q8TCC7 542 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 RNF121Q9H920 327 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 FOLH1BQ9HBA9 442 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 MBNL1Q9NR56 388 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 ARHGAP33O14559 1287 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 LCN1P31025 176 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 GNG2P59768 71 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 CCINQ13939 588 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 OR2G6Q5TZ20 316 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 FAM111BQ6SJ93 734 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 NCCRP1Q6ZVX7 275 aaPredicted RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 OR4F15Q8NGB8 312 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 OR5T3Q8NGG3 340 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 SETD6Q8TBK2 473 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 TRMT10AQ8TBZ6 339 aaKnown RBP14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 HHATLQ9HCP6 504 aa14.34□□□□□ -0.11
PCDHA3-202ENST00000532566 CXorf51AA0A1B0GTR3 108 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 CTDSP2O14595 271 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 KDM4BO94953 1096 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 UBL4AP11441 157 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 GTF2F2P13984 249 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 LTB4RQ15722 352 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 DUSP7Q16829 419 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 TMEM31Q5JXX7 168 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 PDSS1Q5T2R2 415 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 PYHIN1Q6K0P9 492 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 ANKRD54Q6NXT1 300 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 SLC46A3Q7Z3Q1 461 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 SLC35F2Q8IXU6 374 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 LRRC56Q8IYG6 542 aaPredicted RBP14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 INO80EQ8NBZ0 244 aaPredicted RBP14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 OR6T1Q8NGN1 323 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 PDXPQ96GD0 296 aa14.33□□□□□ -0.11
PCDHA3-202ENST00000532566 LYRM1O43325 122 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 CD38P28907 300 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 HOXC12P31275 282 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 TNFSF8P32971 234 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 E2F1Q01094 437 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 GPR19Q15760 415 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 BTBD16Q32M84 506 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 DESI1Q6ICB0 168 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 TCEAL6Q6IPX3 200 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 TRIM43Q96BQ3 446 aaPredicted RBP14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 TBC1D20Q96BZ9 403 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 TMEM246Q9BRR3 403 aa14.33□□□□□ -0.12
PCDHA3-202ENST00000532566 OR2B2Q9GZK3 357 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms