RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 STK35Q8TDR2 534 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM41AQ96HV5 264 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 CXorf58Q96LI9 332 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 CDCA4Q9BXL8 241 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 DERL2Q9GZP9 239 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 TMPRSS5Q9H3S3 457 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 EXO5Q9H790 373 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 GSN-AS1Q9NRJ2 163 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 SEC14L3Q9UDX4 400 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 MRPS17Q9Y2R5 130 aaKnown RBP6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 CFAP20Q9Y6A4 193 aaKnown RBP6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 V9GYH0 126 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 PCM1Q15154 2024 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 DOCK8Q8NF50 2099 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 TRIOO75962 3097 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 IQCF5A8MTL0 148 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 MATN3O15232 486 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 PLA2G10O15496 165 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 CLDN9O95484 217 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 FGF1P05230 155 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 FPR3P25089 353 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 EPHA2P29317 976 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 EIF2S3P41091 472 aaKnown RBP6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 CLCNKAP51800 687 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 AKR1C2P52895 323 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 CDH11P55287 796 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 YBEYP58557 167 aaPredicted RBP6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 VLDLRP98155 873 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 AKR1C1Q04828 323 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 PLK5Q496M5 336 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM150AQ86TG1 271 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 AVL9Q8NBF6 648 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 SMAP2Q8WU79 429 aaPredicted RBP6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEM174Q8WUU8 243 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 FCAMRQ8WWV6 532 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 NT5C3BQ969T7 300 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 NTAN1Q96AB6 310 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 TRMT61AQ96FX7 289 aaKnown RBP6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 TOLLIPQ9H0E2 274 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 SHARPINQ9H0F6 387 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC25A51Q9H1U9 297 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 PLAC1Q9HBJ0 212 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 POT1Q9NUX5 634 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 KLHL28Q9NXS3 571 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 KLF15Q9UIH9 416 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF225Q9UK10 706 aa6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 NOP16Q9Y3C1 178 aaKnown RBP6.39□□□□□ -1.39
TGFBR3-209ENST00000532540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 C2orf92A0A1B0GVN3 265 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 A0A1W2PRB8 838 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 TRBC2A0A5B9 178 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 MCIDASD6RGH6 385 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 E7EQ34 232 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 UPK1AO00322 258 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 GOSR2O14653 212 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 CASC3O15234 703 aaKnown RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 STK16O75716 305 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 EGFP01133 1207 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 LPLP06858 475 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 GIPP09681 153 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 PSMB1P20618 241 aaKnown RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 HOXD9P28356 352 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 GCGRP47871 477 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 EVX1P49640 407 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 UBE2IP63279 158 aaKnown RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 NFKB2Q00653 900 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 TAP2Q03519 686 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 C1orf61Q13536 156 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SCARB2Q14108 478 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF79Q15937 498 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 UGT3A2Q3SY77 523 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 LGALSLQ3ZCW2 172 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ADAM5Q6NVV9 412 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 C22orf39Q6P5X5 142 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF852Q6ZMS4 543 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF546Q86UE3 836 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 TMEFF1Q8IYR6 380 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 OR6V1Q8N148 313 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 RELL2Q8NC24 303 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 OR2AP1Q8NGE2 309 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 OR9Q2Q8NGE9 314 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 TM9SF4Q92544 642 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 TEX37Q96LM6 180 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 RBP7Q96R05 134 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 TRIM36Q9NQ86 728 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 UTS2RQ9UKP6 389 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC27A6Q9Y2P4 619 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 MYOFQ9NZM1 2061 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 DAPL1A0PJW8 107 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 BTBD17A6NE02 478 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 FAM74A7A6NL05 159 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SGK494L7N484 410 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ABCD4O14678 606 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 MBTPS2O43462 519 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 ARL6IP5O75915 188 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 PDGFBP01127 241 aaPredicted RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 H1F0P07305 194 aaKnown RBP6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 PRSS56P0CW18 603 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 SPP1P10451 314 aa6.38□□□□□ -1.39
TGFBR3-209ENST00000532540 NOS3P29474 1203 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms