RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 CD300LGQ6UXG3 332 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 LRRTM4Q86VH4 590 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 CPNE8Q86YQ8 564 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SENP5Q96HI0 755 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 MED18Q9BUE0 208 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SLC12A9Q9BXP2 914 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 CTDSP1Q9GZU7 261 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 GALPQ9UBC7 116 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 ZDHHC2Q9UIJ5 367 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SSUH2Q9Y2M2 353 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 ZFP37Q9Y6Q3 630 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 PXDNLA1KZ92 1463 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 ANKRD30BLA7E2S9 258 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 TRIM77I1YAP6 450 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 CXCL14O95715 111 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 ELK1P19419 428 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 DDCP20711 480 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 PTNP21246 168 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 DTYMKP23919 212 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 IL2RGP31785 369 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 RAB1AP62820 205 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 EIF4HQ15056 248 aaKnown RBP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 FAM214AQ32MH5 1076 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 LRIT3Q3SXY7 679 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 RNLSQ5VYX0 342 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 FOXR2Q6PJQ5 311 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 TEX261Q6UWH6 196 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 IL1F10Q8WWZ1 152 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 PARD6AQ9NPB6 346 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 FBXL2Q9UKC9 423 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 HRH3Q9Y5N1 445 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 U3KQ87 197 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 ASTN1O14525 1302 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 M0R2Z0 102 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 BMPR1BO00238 502 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 LRCH4O75427 683 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 LYPLA2O95372 231 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 EGFP01133 1207 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 LCATP04180 440 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 OMGP23515 440 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 OR1D2P34982 312 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 BMPR1AP36894 532 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 WDR4P57081 412 aaKnown RBP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 KRTDAPP60985 99 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 RPS13P62277 151 aaKnown RBP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 LRRC55Q6ZSA7 311 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 TECPR1Q7Z6L1 1165 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SERPINA11Q86U17 422 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 ZNF547Q8IVP9 402 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 BPIFB2Q8N4F0 458 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 MINDY1Q8N5J2 469 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 MED9Q9NWA0 146 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SLC23A2Q9UGH3 650 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 RIPK3Q9Y572 518 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SALL3Q9BXA9 1300 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 CNTNAP4Q9C0A0 1308 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 PDHXO00330 501 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 LALBAP00709 142 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 RD3LP0DJH9 198 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 LIPCP11150 499 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 MYF6P23409 242 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 EMP3P54852 163 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 KCNC3Q14003 757 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 RBMS2Q15434 407 aaKnown RBP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 NANOGP8Q6NSW7 305 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 B3GNT9Q6UX72 402 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 DBF4BQ8NFT6 615 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 PLD4Q96BZ4 506 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SLC2A13Q96QE2 648 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 NANOGQ9H9S0 305 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 EHFQ9NZC4 300 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 PCDHA9Q9Y5H5 950 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SPATA31A3Q5VYP0 1347 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 TNFP01375 233 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 CAPNS1P04632 268 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SPATA31C1P0DKV0 1188 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 GLUD2P49448 558 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 CLCNKBP51801 687 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SLC9A3R2Q15599 337 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 PHF19Q5T6S3 580 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 KIAA0895LQ68EN5 471 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 RPL7L1Q6DKI1 246 aaKnown RBP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 CDC42BPGQ6DT37 1551 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 ABHD12BQ7Z5M8 362 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 SLC35F2Q8IXU6 374 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 OR4A16Q8NH70 328 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 PXYLP1Q8TE99 480 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 BORCS6Q96GS4 357 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 C11orf84Q9BUA3 381 aaPredicted RBP7.69□□□□□ -1.18
CTNND1-231ENST00000532463 LHPPQ9H008 270 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 ZCCHC4Q9H5U6 513 aa7.69□□□□□ -1.18
CTNND1-231ENST00000532463 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.69□□□□□ -1.185e-7■■■□□ 16.1
CTNND1-231ENST00000532463 SERTM2A0A1B0GWG4 89 aa7.68□□□□□ -1.18
CTNND1-231ENST00000532463 OR6C76A6NM76 312 aa7.68□□□□□ -1.18
CTNND1-231ENST00000532463 B4DGG1 531 aa7.68□□□□□ -1.18
CTNND1-231ENST00000532463 NIPSNAP2O75323 286 aa7.68□□□□□ -1.18
CTNND1-231ENST00000532463 HPNP05981 417 aa7.68□□□□□ -1.18
CTNND1-231ENST00000532463 OR13C7P0DN81 318 aa7.68□□□□□ -1.18
CTNND1-231ENST00000532463 MTHFD2P13995 350 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms