RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 SYTL2Q9HCH5 934 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 GPR83Q9NYM4 423 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 GAGE2DQ9UEU5 116 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 CRLS1Q9UJA2 301 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 PADI2Q9Y2J8 665 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 HEBP2Q9Y5Z4 205 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 ARL5AQ9Y689 179 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 RELNP78509 3460 aa6.13□□□□□ -1.43
CSDE1-213ENST00000530784 FLNCQ14315 2725 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 hCG_1818297A0A087WSY0 165 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 A6NL46 340 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 C2orf74A8MZ97 194 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 HACD1B0YJ81 288 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 E7EQ34 232 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 PLOD2O00469 737 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 SLC22A2O15244 555 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 ANXA9O76027 345 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 LCA5LO95447 670 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 AGTP01019 485 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 ALPPP05187 535 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 RNF224P0DH78 156 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 GNB3P16520 340 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 NMBRP28336 390 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 EPHA2P29317 976 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 LMAN1P49257 510 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 PRLHRP49683 370 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 GEMP55040 296 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 EPS8Q12929 822 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 MFAP5Q13361 173 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 RAPSNQ13702 412 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 IRF3Q14653 427 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 TAF1AQ15573 450 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-213ENST00000530784 TAZQ16635 292 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 KYNUQ16719 465 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 ZNF789Q5FWF6 425 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 AMIGO1Q86WK6 493 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 KATNAL2Q8IYT4 538 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 IQCKQ8N0W5 287 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 HEXDCQ8WVB3 486 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 N4BP2L2Q92802 583 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-213ENST00000530784 RBM41Q96IZ5 413 aaKnown RBP6.12□□□□□ -1.43
CSDE1-213ENST00000530784 LRR1Q96L50 414 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 ZNF582Q96NG8 517 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-213ENST00000530784 COPS8Q99627 209 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 CHP1Q99653 195 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 C17orf62Q9BQA9 187 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 FERMT1Q9BQL6 677 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 PITPNM3Q9BZ71 974 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 GBA3Q9H227 469 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 CCDC68Q9H2F9 335 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 COG4Q9H9E3 785 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 VPS37BQ9H9H4 285 aa6.12□□□□□ -1.43
CSDE1-213ENST00000530784 NHEJ1Q9H9Q4 299 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-213ENST00000530784 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.12□□□□□ -1.43
CSDE1-213ENST00000530784 MACROD2A1Z1Q3 448 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 H7C0C1 242 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 BTN3A3O00478 584 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 ZNF749O43361 778 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 GPR137BO60478 399 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 MITFO75030 526 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-213ENST00000530784 CAPN1P07384 714 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 HBQ1P09105 142 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 ATP1B2P14415 290 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-213ENST00000530784 PVRP15151 417 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 PRDX3P30048 256 aaKnown RBP6.11□□□□□ -1.43
CSDE1-213ENST00000530784 OTX2P32243 289 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 ATP5OP48047 213 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 VEGFCP49767 419 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 MFAP4P55083 255 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 XIAPP98170 497 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 PRPSAP1Q14558 356 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 FCN2Q15485 313 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 LYPLAL1Q5VWZ2 237 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 KLC3Q6P597 504 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 CDHR3Q6ZTQ4 885 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 SZRD1Q7Z422 152 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 SNX20Q7Z614 316 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 HOOK3Q86VS8 718 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 CDKL3Q8IVW4 592 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-213ENST00000530784 RCOR2Q8IZ40 523 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 CLEC1AQ8NC01 280 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 ADAD2Q8NCV1 583 aaKnown RBP6.11□□□□□ -1.43
CSDE1-213ENST00000530784 OR2T12Q8NG77 320 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 OR52E1Q8NGJ3 308 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 OR13C4Q8NGS5 318 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 LRRC45Q96CN5 670 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 FER1L6-AS2Q96M78 137 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 IP6K3Q96PC2 410 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 PPP1R2P1Q96PQ5 205 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 APOL2Q9BQE5 337 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 ILKAPQ9H0C8 392 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-213ENST00000530784 OR52A5Q9H2C5 316 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 GOLPH3Q9H4A6 298 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 C5AR2Q9P296 337 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 NAV2Q8IVL1 2488 aa6.11□□□□□ -1.43
CSDE1-213ENST00000530784 APOC4-APOC2K7ER74 178 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 NDUFS4O43181 175 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 KLHL41O60662 606 aa6.1□□□□□ -1.43
CSDE1-213ENST00000530784 KLF7O75840 302 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-213ENST00000530784 OR2B3O76000 313 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms