RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 MRPL41Q8IXM3 137 aaKnown RBP7.98□□□□□ -1.13
CTNND1-227ENST00000530748 TMEM163Q8TC26 289 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 ADAMTS19Q8TE59 1207 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 TMEM174Q8WUU8 243 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 ZBED3Q96IU2 234 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-227ENST00000530748 C7orf34Q96L11 122 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 SFXN2Q96NB2 322 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 OR5B12Q96R08 314 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 ZNF300Q96RE9 604 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-227ENST00000530748 CCNL2Q96S94 520 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-227ENST00000530748 MAP3K3Q99759 626 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 INIPQ9NRY2 104 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 MCTS1Q9ULC4 181 aaKnown RBP7.98□□□□□ -1.13
CTNND1-227ENST00000530748 RPH3AQ9Y2J0 694 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-227ENST00000530748 CACNG2Q9Y698 323 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 ALS2Q96Q42 1657 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 A0A0U1RQS6 177 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 NAP1L6A6NFF2 107 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 SLC9B1P1A6NJY1 282 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 CHRNB4P30926 498 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 SFTPDP35247 375 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 RAB40BQ12829 278 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 ENTPD8Q5MY95 495 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 SFRP4Q6FHJ7 346 aaPredicted RBP7.98□□□□□ -1.13
CTNND1-227ENST00000530748 OR5K2Q8NHB8 316 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 SYNPRQ8TBG9 265 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 IL20RAQ9UHF4 553 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 ENPP5Q9UJA9 477 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 ERVK-19Q9WJR5 959 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 PCDHGA8Q9Y5G5 932 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 USP3Q9Y6I4 520 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 TJP1Q07157 1748 aa7.98□□□□□ -1.13
CTNND1-227ENST00000530748 NPIPA5A0A0B4J1W7 369 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 NPIPA7E9PJI5 369 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 NPIPA8P0DM63 369 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 GDF1P27539 372 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CCR7P32248 378 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CAMLGP49069 296 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 NCS1P62166 190 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 GK2Q14410 553 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 B3GNT9Q6UX72 402 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CFAP77Q6ZQR2 320 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 FAM83HQ6ZRV2 1179 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 ARFGAP1Q8N6T3 406 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CLEC1AQ8NC01 280 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 NLGN4YQ8NFZ3 816 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 FOXRED1Q96CU9 486 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 EMC3Q9P0I2 261 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SRPX2O60687 465 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 LCATP04180 440 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 GGTA1PQ4G0N0 100 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 FAM69AQ5T7M9 428 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 RTL6Q6ICC9 239 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 TMEM184AQ6ZMB5 413 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 ZNF695Q8IW36 515 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 LILRB2Q8N423 598 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 C3orf58Q8NDZ4 430 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 ZMYND19Q96E35 227 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 TCTN2Q96GX1 697 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 PDLIM5Q96HC4 596 aaKnown RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 INTS14Q96SY0 518 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 DPCDQ9BVM2 203 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 ABCG5Q9H222 651 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SACM1LQ9NTJ5 587 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CPNE7Q9UBL6 633 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 ADAM29Q9UKF5 820 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 LOC102723532A0A0G2JNH3 316 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 FAM171A2A8MVW0 826 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 F5H5P2 479 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SORBS2O94875 1100 aaKnown RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 AKAIN1P0CW23 69 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 HOXD9P28356 352 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SOX3P41225 446 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CSNK1A1P48729 337 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 PTH2RP49190 550 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 RAB38P57729 211 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 DCAF7P61962 342 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 MRPS21P82921 87 aaKnown RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 FAM26DQ5JW98 314 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 UBE2NLQ5JXB2 153 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 PLAG1Q6DJT9 500 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CPOQ8IVL8 374 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 DNAJC22Q8N4W6 341 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CLSTN3Q9BQT9 956 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 INTS6Q9UL03 887 aaKnown RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SULT2B1O00204 365 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 CPMP14384 443 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 DCTP40126 519 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 XCR1P46094 333 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 ERVK-16P61578 105 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 GLO1Q04760 184 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 NFATC3Q12968 1075 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 PIN1Q13526 163 aaPredicted RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 GPR50Q13585 617 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 OR1Q1Q15612 314 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 RPE65Q16518 533 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 ZNF691Q5VV52 312 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 SLC6A19Q695T7 634 aa7.97□□□□□ -1.13
CTNND1-227ENST00000530748 MEPCEQ7L2J0 689 aaKnown RBP7.97□□□□□ -1.13
CTNND1-227ENST00000530748 FAM217AQ8IXS0 508 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms