RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 C16orf47Q6ZP98 133 aaPredicted RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 MSANTD1Q6ZTZ1 278 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 ANKRD46Q86W74 232 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 SIRT6Q8N6T7 355 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 OR52R1Q8NGF1 315 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 GOT1L1Q8NHS2 421 aaPredicted RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 C16orf52Q8NHV5 167 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 ZFP28Q8NHY6 868 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 NUBPLQ8TB37 319 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 HOXB13Q92826 284 aaPredicted RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 FAM120BQ96EK7 910 aaKnown RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 GIMAP5Q96F15 307 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 VSTM2LQ96N03 204 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 CCDC115Q96NT0 180 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 PRPF18Q99633 342 aaKnown RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 SMAD5Q99717 465 aaKnown RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 ITPAQ9BY32 194 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 NMUR2Q9GZQ4 415 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 WWTR1Q9GZV5 400 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 NSRP1Q9H0G5 558 aaKnown RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 MYLK2Q9H1R3 596 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 RABEP2Q9H5N1 569 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 ZBTB20Q9HC78 741 aaPredicted RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 FAM120CQ9NX05 1096 aaKnown RBP8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 COPS7AQ9UBW8 275 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 BTNL2Q9UIR0 455 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 TUBD1Q9UJT1 453 aa8.05□□□□□ -1.12
CCDC90B-217ENST00000530253 CPAMD8Q8IZJ3 1885 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 NBASA2RRP1 2371 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 PRSS51A0A1B0GVH4 220 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 PRAMEF2O60811 474 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 ZFAND5O76080 213 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 FAM107AO95990 144 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 C1QCP02747 245 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 IL6P05231 212 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 HKR1P10072 659 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 NCF2P19878 526 aaPredicted RBP8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 S100A3P33764 101 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 MANFP55145 182 aaKnown RBP8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 MLF1P58340 268 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 MFAP5Q13361 173 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 RPS6KA2Q15349 733 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 ACER2Q5QJU3 275 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 NPSR1Q6W5P4 371 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 BEST3Q8N1M1 668 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 SLC5A8Q8N695 610 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 PIK3C3Q8NEB9 887 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 C17orf47Q8NEP4 570 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 SFXN5Q8TD22 340 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 GTF2H4Q92759 462 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 ADIPOR1Q96A54 375 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 VPS33AQ96AX1 596 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 CCT8L2Q96SF2 557 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 ZBTB18Q99592 522 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 INPP5KQ9BT40 448 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 DEFB126Q9BYW3 111 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 ADNPQ9H2P0 1102 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 EPS8L2Q9H6S3 715 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 LIN28AQ9H9Z2 209 aaKnown RBP8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 SLC6A13Q9NSD5 602 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 DDX18Q9NVP1 670 aaKnown RBP8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 TAS2R9Q9NYW1 312 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 CCDC167Q9P0B6 97 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 HEMK1Q9Y5R4 338 aaPredicted RBP8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 LRRK2Q5S007 2527 aa8.04□□□□□ -1.12
CCDC90B-217ENST00000530253 TRBV5-3A0A0A0MS03 114 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 A8MUI8 341 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 MKRN2OSH3BPM6 223 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 NR5A2O00482 541 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 FCHO1O14526 889 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 EMC8O43402 210 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 COQ9O75208 318 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 BCAS2O75934 225 aaPredicted RBP8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 PSG6Q00889 435 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 GTDC1Q4AE62 458 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 AGKQ53H12 422 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 PIGGQ5H8A4 983 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 PAGE3Q5JUK9 113 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 COLEC12Q5KU26 742 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 C6orf163Q5TEZ5 329 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 ANXA8L1Q5VT79 327 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 AGAP7PQ5VUJ5 663 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 MFSD12Q6NUT3 480 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 SLC2A7Q6PXP3 512 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 IGFL3Q6UXB1 125 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 ISLR2Q6UXK2 745 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 CPLX4Q7Z7G2 160 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 RPS19BP1Q86WX3 136 aaKnown RBP8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 MSRB3Q8IXL7 192 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 OR5AK3PQ8NH89 298 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 SPDL1Q96EA4 605 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 WBP1Q96G27 269 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 AGAP4Q96P64 663 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 MS4A4EQ96PG1 132 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 BTBD9Q96Q07 612 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 OR52E6Q96RD3 313 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 RASL10BQ96S79 203 aa8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 LMF2Q9BU23 707 aaKnown RBP8.03□□□□□ -1.12
CCDC90B-217ENST00000530253 SLC25A23Q9BV35 468 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms