RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 IDI1Q13907 227 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 ATXN7L3Q14CW9 347 aaPredicted RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 TPSAB1Q15661 275 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 PPP1R3AQ16821 1122 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 CYP51A1Q16850 503 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 TPD52L1Q16890 204 aaPredicted RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 FAM74A3Q4VXF1 159 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 CFAP157Q5JU67 520 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 LGSNQ5TDP6 509 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 TPGS2Q68CL5 300 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 PYHIN1Q6K0P9 492 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 DPY19L4Q7Z388 723 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 SH2D6Q7Z4S9 175 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 CTAGE6Q86UF2 777 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 SLC25A42Q86VD7 318 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 SLC22A18ASQ8N1D0 253 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 BPIFB2Q8N4F0 458 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 OR13C2Q8NGS9 318 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 ZNF671Q8TAW3 534 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 PNPT1Q8TCS8 783 aaKnown RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 TFB1MQ8WVM0 346 aaKnown RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 LRRC40Q9H9A6 602 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 EXOSC3Q9NQT5 275 aaKnown RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 AIPL1Q9NZN9 384 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 DHRS4-AS1Q9P1J3 65 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 ARMCX1Q9P291 453 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 ANAPC7Q9UJX3 599 aa3.54□□□□□ -1.84
C11orf88-204ENST00000529661 TDRD15B5MCY1 1934 aaKnown RBP3.54□□□□□ -1.84
C11orf88-204ENST00000529661 MBLAC1A4D2B0 266 aaPredicted RBP3.53□□□□□ -1.84
C11orf88-204ENST00000529661 SRRM5B3KS81 715 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 H0YC42 278 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 BOLA2-SMG1P6H3BVE0 249 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 TM7SF2O76062 418 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 KBTBD11O94819 623 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 MAGEA5P43359 124 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 PPT1P50897 306 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 ARHGDIBP52566 201 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 PLA2G16P53816 162 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 HMGCS2P54868 508 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 PEX6Q13608 980 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 DPYSL3Q14195 570 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 MXD4Q14582 209 aaPredicted RBP3.53□□□□□ -1.84
C11orf88-204ENST00000529661 CHI3L2Q15782 390 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 SYPL1Q16563 259 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 MAPK6Q16659 721 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 ZNF57Q68EA5 555 aaPredicted RBP3.53□□□□□ -1.84
C11orf88-204ENST00000529661 CDH26Q8IXH8 852 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 ZNF679Q8IYX0 411 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 ZSCAN4Q8NAM6 433 aaPredicted RBP3.53□□□□□ -1.84
C11orf88-204ENST00000529661 ZNF75CPQ92670 426 aaPredicted RBP3.53□□□□□ -1.84
C11orf88-204ENST00000529661 TOMM40LQ969M1 308 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 OMDQ99983 421 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 ALG12Q9BV10 488 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 HCAR1Q9BXC0 346 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 CLEC5AQ9NY25 188 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 SMPD3Q9NY59 655 aaPredicted RBP3.53□□□□□ -1.84
C11orf88-204ENST00000529661 EHFQ9NZC4 300 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 CRLS1Q9UJA2 301 aa3.53□□□□□ -1.84
C11orf88-204ENST00000529661 C15orf38-AP3S2A0A0A6YYH1 394 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 IGKV6D-41A0A0C4DH26 115 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 E9PAM4 449 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 G3V3Y1 287 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 K7EQM0 130 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 SAP18O00422 153 aaKnown RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 SLC17A2O00624 439 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 STX7O15400 261 aaKnown RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 LRRTM2O43300 516 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 EFNA2O43921 213 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 GJB5O95377 273 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 PIGRP01833 764 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 ALPIP09923 528 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 H2AFZP0C0S5 128 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 CT45A10P0DMU9 189 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 UMPSP11172 480 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 LAMP1P11279 417 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 FOLR2P14207 255 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 TBXA2RP21731 343 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 HMGCLP35914 325 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 TNNT2P45379 298 aaPredicted RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 BDKRB1P46663 353 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 RPL34P49207 117 aaKnown RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 SH3BGRP55822 239 aaPredicted RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 CBX1P83916 185 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 DDX39BQ13838 428 aaKnown RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 CRMP1Q14194 572 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 IMMTQ16891 758 aaKnown RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 CCDC152Q4G0S7 254 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 SLC25A30Q5SVS4 291 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 SCYL2Q6P3W7 929 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 IFNEQ86WN2 208 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 SLC39A11Q8N1S5 342 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 LRRC43Q8N309 656 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 EIF1ADQ8N9N8 165 aaKnown RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 ZBED6CLQ96FA7 236 aaPredicted RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 C1orf147Q96MC9 270 aaPredicted RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 ZNF607Q96SK3 696 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 CCT7Q99832 543 aa3.52□□□□□ -1.85
C11orf88-204ENST00000529661 OPN3Q9H1Y3 402 aaPredicted RBP3.52□□□□□ -1.85
C11orf88-204ENST00000529661 PRODH2Q9UF12 536 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms