RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 VDAC3Q9Y277 283 aa12.14□□□□□ -0.47
CAPN1-215ENST00000528396 IGLV3-32A0A0A0MS00 114 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 A0A0G2JND7 137 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 FAM90A27PA6NNH2 459 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 HSPB2A8KAH6 182 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 NR5A2O00482 541 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 ZIC3O60481 467 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 EDF1O60869 148 aaKnown RBP12.13□□□□□ -0.47
CAPN1-215ENST00000528396 IL2RAP01589 272 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 VIMP08670 466 aaKnown RBP12.13□□□□□ -0.47
CAPN1-215ENST00000528396 TROVE2P10155 538 aaKnown RBP eCLIP12.13□□□□□ -0.47
CAPN1-215ENST00000528396 PEPDP12955 493 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 CPN1P15169 458 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 CDKN2CP42773 168 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 ZFP36L2P47974 494 aaKnown RBP12.13□□□□□ -0.47
CAPN1-215ENST00000528396 STARP49675 285 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 RNF144AP50876 292 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-215ENST00000528396 CCR4P51679 360 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 GFRA1P56159 465 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 EEFSECP57772 596 aaKnown RBP12.13□□□□□ -0.47
CAPN1-215ENST00000528396 SQLEQ14534 574 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 HSPB2Q16082 182 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 ARHGAP11BQ3KRB8 267 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 GLYR1Q49A26 553 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-215ENST00000528396 DCST1Q5T197 706 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 HIST2H2BCQ6DN03 193 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 RTL6Q6ICC9 239 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 UBQLNLQ8IYU4 475 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 CHDHQ8NE62 594 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-215ENST00000528396 WDYHV1Q96HA8 205 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 SDF2Q99470 211 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 SERHL2Q9H4I8 314 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 KCNJ16Q9NPI9 418 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 CCDC167Q9P0B6 97 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 MKLN1Q9UL63 735 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 LIPT1Q9Y234 373 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 WDR45Q9Y484 360 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 DTNAQ9Y4J8 743 aa12.13□□□□□ -0.47
CAPN1-215ENST00000528396 OR2M5A3KFT3 312 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 TMEM247A6NEH6 219 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 H3BML4 177 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 SEC14L5O43304 696 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 CYP7B1O75881 506 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 EPPINO95925 133 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 UBL4AP11441 157 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 ME2P23368 584 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 CRATP43155 626 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 AGKQ53H12 422 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 KLHL26Q53HC5 615 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 PDZK1Q5T2W1 519 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 RIPPLY2Q5TAB7 128 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 SP5Q6BEB4 398 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-215ENST00000528396 ARSKQ6UWY0 536 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 OR5M1Q8NGP8 315 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 RFWD2Q8NHY2 731 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 SMPDL3BQ92485 455 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 ZBTB8AQ96BR9 441 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 ROPN1LQ96C74 230 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 NMUR2Q9GZQ4 415 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 CACYBPQ9HB71 228 aaKnown RBP12.12□□□□□ -0.47
CAPN1-215ENST00000528396 POLE3Q9NRF9 147 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 CARD8Q9Y2G2 431 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 MED12Q93074 2177 aa12.12□□□□□ -0.47
CAPN1-215ENST00000528396 A0A0G2JNJ9 132 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 SERINC4A6NH21 518 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 CD8B2A6NJW9 211 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 DVL2O14641 736 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 ZNF264O43296 627 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 ATP8B1O43520 1251 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 TNFRSF21O75509 655 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 NR2F1P10589 423 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 COX6B1P14854 86 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 ZNF17P17021 662 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 MAGEA8P43361 318 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 MRPL19P49406 292 aaKnown RBP12.11□□□□□ -0.47
CAPN1-215ENST00000528396 LHX2P50458 406 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 ATP4BP51164 291 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 RPS3AP61247 264 aaKnown RBP12.11□□□□□ -0.47
CAPN1-215ENST00000528396 ZNF117Q03924 483 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 CD226Q15762 336 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 BCL2A1Q16548 175 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
CAPN1-215ENST00000528396 NSUN5P2Q63ZY6 315 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 HEPHL1Q6MZM0 1159 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 PPP4R4Q6NUP7 873 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 SLC2A7Q6PXP3 512 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 EIF3MQ7L2H7 374 aaKnown RBP12.11□□□□□ -0.47
CAPN1-215ENST00000528396 P4HA3Q7Z4N8 544 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 GRAMD2AQ8IUY3 354 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 TOR1AIP2Q8NFQ8 470 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 LILRB4Q8NHJ6 448 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 ZPLD1Q8TCW7 415 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 SPDL1Q96EA4 605 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 LRRC46Q96FV0 321 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 TM9SF2Q99805 663 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 TUBA1CQ9BQE3 449 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 ZNF350Q9GZX5 532 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 RAD21L1Q9H4I0 556 aa12.11□□□□□ -0.47
CAPN1-215ENST00000528396 CALHM2Q9HA72 323 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms