RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 NKIRAS1Q9NYS0 192 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 NDRG3Q9UGV2 375 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 ZNF337Q9Y3M9 751 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 ZNF175Q9Y473 711 aa8.68□□□□□ -1.02
CHD7-208ENST00000528280 OR2M5A3KFT3 312 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 C7orf72A4D263 438 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 SLC22A20A6NK97 555 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 EEF1E1-BLOC1S5C9J1V9 151 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 GTPBP1O00178 669 aaKnown RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 MSTNO14793 375 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 CASKO14936 926 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 EEF1E1O43324 174 aaKnown RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 C6orf47O95873 294 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 IGKV1D-16P01601 117 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 GUSBP08236 651 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 EPXP11678 715 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 BGNP21810 368 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 MATN1P21941 496 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 ME2P23368 584 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 ADH6P28332 368 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 ANXA11P50995 505 aaKnown RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 ATP12AP54707 1039 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 RAC1P63000 192 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 TXNL4AP83876 142 aaKnown RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 LASP1Q14847 261 aaKnown RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 PDCD2Q16342 344 aaPredicted RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 TMEM44Q2T9K0 475 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 FLYWCH1Q4VC44 716 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 FIGNL1Q6PIW4 674 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 APOOLQ6UXV4 268 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 C6orf120Q7Z4R8 191 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 TMEM200AQ86VY9 491 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 GTPBP8Q8N3Z3 284 aaPredicted RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 KRTCAP2Q8N6L1 136 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 RELL2Q8NC24 303 aaPredicted RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 B4GALNT2Q8NHY0 566 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 TESCQ96BS2 214 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 INTS12Q96CB8 462 aaKnown RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 SH3GL2Q99962 352 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 SLC39A3Q9BRY0 314 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 YIPF4Q9BSR8 244 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 RBM24Q9BX46 236 aaKnown RBP8.67□□□□□ -1.02
CHD7-208ENST00000528280 PRRG4Q9BZD6 226 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 MEAF6Q9HAF1 191 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 TIGARQ9NQ88 270 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 GLRX2Q9NS18 164 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 ELOVL5Q9NYP7 299 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 FLRT3Q9NZU0 649 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 CLCF1Q9UBD9 225 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 GIMAP2Q9UG22 337 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 PACSIN3Q9UKS6 424 aa8.67□□□□□ -1.02
CHD7-208ENST00000528280 INTS1Q8N201 2190 aaKnown RBP8.66□□□□□ -1.02
CHD7-208ENST00000528280 TMEM120BA0PK00 339 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 GJE1A6NN92 205 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 A8MXE2 369 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 H3BML4 177 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 HDAC3O15379 428 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 EIF4E2O60573 245 aaKnown RBP8.66□□□□□ -1.02
CHD7-208ENST00000528280 STX11O75558 287 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 CTAG2O75638 210 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 SASH3O75995 380 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 SYNGR4O95473 234 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 PABPC4LP0CB38 370 aaKnown RBP8.66□□□□□ -1.02
CHD7-208ENST00000528280 EFNA1P20827 205 aaPredicted RBP8.66□□□□□ -1.02
CHD7-208ENST00000528280 UQCRC2P22695 453 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 S100A3P33764 101 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 CPA2P48052 419 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 SUMO3P55854 103 aaPredicted RBP8.66□□□□□ -1.02
CHD7-208ENST00000528280 HBA1P69905 142 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 BST1Q10588 318 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 MPP2Q14168 576 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 CASP8Q14790 479 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 KLHL26Q53HC5 615 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 HSP90B2PQ58FF3 399 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 DCST2Q5T1A1 773 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 ATAD3BQ5T9A4 648 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 OGFOD2Q6N063 350 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 CDH24Q86UP0 819 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 ZZZ3Q8IYH5 903 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 UBQLNLQ8IYU4 475 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 METTL25Q8N6Q8 603 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 TRIML2Q8N7C3 387 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 ANKRD42Q8N9B4 389 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 GLB1L3Q8NCI6 653 aaPredicted RBP8.66□□□□□ -1.02
CHD7-208ENST00000528280 PHOSPHO1Q8TCT1 267 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 CDS1Q92903 461 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 DACH2Q96NX9 599 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 SORT1Q99523 831 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 ZBTB18Q99592 522 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 POLDIP3Q9BY77 421 aaKnown RBP8.66□□□□□ -1.02
CHD7-208ENST00000528280 NUF2Q9BZD4 464 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 RTN4RQ9BZR6 473 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 C20orf27Q9GZN8 174 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 CXorf36Q9H7Y0 433 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 POLE3Q9NRF9 147 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 GPATCH2Q9NW75 528 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 DNAJB12Q9NXW2 375 aaKnown RBP8.66□□□□□ -1.02
CHD7-208ENST00000528280 PRDM4Q9UKN5 801 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 DTNAQ9Y4J8 743 aa8.66□□□□□ -1.02
CHD7-208ENST00000528280 A0A1W2PNV4 684 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms