RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 COQ8AQ8NI60 647 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 HAVCR2Q8TDQ0 301 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 ACOT11Q8WXI4 607 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 PIGKQ92643 395 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 PTP4A1Q93096 173 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 SAMD8Q96LT4 415 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 TIMP4Q99727 224 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 GLIPR2Q9H4G4 154 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 CAMK2AQ9UQM7 478 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 A0A0B4J203 849 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 PLSCR5A0PG75 271 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 NDUFA2O43678 99 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 TMPRSS11DO60235 418 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 CKMP06732 381 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 NMBP08949 121 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 SAGP10523 405 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 NFYAP23511 347 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 CCR8P51685 355 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 E2F1Q01094 437 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 FUT5Q11128 374 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 SEZ6L2Q6UXD5 910 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 NUDT13Q86X67 352 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 TRAPPC5Q8IUR0 188 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 OR4D9Q8NGE8 314 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 ZFPM2Q8WW38 1151 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 THAP4Q8WY91 577 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 AMDHD1Q96NU7 426 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 MS4A8Q9BY19 250 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 OR10A4Q9H209 315 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 ANKRD19PQ9H560 264 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 AUNIPQ9H7T9 357 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 MRPL15Q9P015 296 aaKnown RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 POM121CA8CG34 1229 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 A8MXK9 166 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 GSTZ1O43708 216 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-214ENST00000528165 STX11O75558 287 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 NCBP2P52298 156 aaKnown RBP eCLIP13.67□□□□□ -0.22
CAPN1-214ENST00000528165 MLC1Q15049 377 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 ACSM3Q53FZ2 586 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 FAM69AQ5T7M9 428 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 NIPAL3Q6P499 406 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 MEPCEQ7L2J0 689 aaKnown RBP13.67□□□□□ -0.22
CAPN1-214ENST00000528165 ADCK2Q7Z695 626 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 PXKQ7Z7A4 578 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 SLC44A3Q8N4M1 653 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 OR11G2Q8NGC1 345 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 SMIM4Q8WVI0 70 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 MARC2Q969Z3 335 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 IFT27Q9BW83 186 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 ELAC1Q9H777 363 aaKnown RBP13.67□□□□□ -0.22
CAPN1-214ENST00000528165 MED20Q9H944 212 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 ABRACLQ9P1F3 81 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 GPR55Q9Y2T6 319 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-214ENST00000528165 LGALS8O00214 317 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 SYT5O00445 386 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 GRM6O15303 877 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 MID1O15344 667 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 SNAPC5O75971 98 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 WDPCPO95876 746 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 SERPIND1P05546 499 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 PSMB1P20618 241 aaKnown RBP13.67□□□□□ -0.22
CAPN1-214ENST00000528165 TRHRP34981 398 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-214ENST00000528165 PTGER1P34995 402 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 ACVR1BP36896 505 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 TAS2R43P59537 309 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 KIAA1024LP59773 190 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 DHODHQ02127 395 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 DECR1Q16698 335 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 ASPGQ86U10 573 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 IZUMO1Q8IYV9 350 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 C17orf47Q8NEP4 570 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 SARGQ9BW04 601 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 TTYH1Q9H313 450 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-214ENST00000528165 PLAGL1Q9UM63 463 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 RCE1Q9Y256 329 aa13.67□□□□□ -0.22
CAPN1-214ENST00000528165 A0A1B0GUH1 482 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 LPLP06858 475 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 PROS1P07225 676 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 ATF1P18846 271 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 POU3F2P20265 443 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-214ENST00000528165 SLC16A1P53985 500 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 TPGS2Q68CL5 300 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 LCTLQ6UWM7 567 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 ALKAL2Q6UX46 152 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 C17orf64Q86WR6 236 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 VRK2Q86Y07 508 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 ANKRD53Q8N9V6 530 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 FAM98AQ8NCA5 519 aaKnown RBP13.66□□□□□ -0.22
CAPN1-214ENST00000528165 OR2A12Q8NGT7 310 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 ARHGDIGQ99819 225 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 RHBGQ9H310 441 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 UBQLN3Q9H347 655 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF334Q9HCZ1 680 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-214ENST00000528165 NPDC1Q9NQX5 325 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-214ENST00000528165 ING1Q9UK53 422 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-214ENST00000528165 J3QLW9 94 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 PIP5K1CO60331 668 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 GMDSO60547 372 aa13.66□□□□□ -0.22
CAPN1-214ENST00000528165 ITGA10O75578 1167 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms