RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 AMZ1Q400G9 498 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 C14orf28Q4W4Y0 310 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SMUG1Q53HV7 270 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 COQ5Q5HYK3 327 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SAMD4BQ5PRF9 694 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 CCNYL2Q5T2Q4 361 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CPTPQ5TA50 214 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 C6orf163Q5TEZ5 329 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 FRMPD2BQ6IN97 320 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 FAM71E1Q6IPT2 247 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 NANOGP8Q6NSW7 305 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ARMC6Q6NXE6 501 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PRMT9Q6P2P2 845 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 FBXO42Q6P3S6 717 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ERICH5Q6P6B1 374 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 FAM111BQ6SJ93 734 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 FAM92BQ6ZTR7 304 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 NCCRP1Q6ZVX7 275 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 PAGE2Q7Z2X7 111 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TMPRSS9Q7Z410 1059 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ASPGQ86U10 573 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 C17orf82Q86X59 251 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 NUDT13Q86X67 352 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 MSRB3Q8IXL7 192 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SLC15A3Q8IY34 581 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SLC35F3Q8IY50 421 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 GPR135Q8IZ08 494 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CLECL1Q8IZS7 167 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TAGAPQ8N103 731 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CLEC4FQ8N1N0 589 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SLC25A45Q8N413 288 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 MINDY1Q8N5J2 469 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TBC1D19Q8N5T2 526 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 Q8N9G6 341 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 SMYD1Q8NB12 490 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 OR52N2Q8NGI0 321 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 OR8K5Q8NH50 307 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 LILRB4Q8NHJ6 448 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CEP76Q8TAP6 659 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SLC26A7Q8TE54 656 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TMEM171Q8WVE6 324 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PYDC1Q8WXC3 89 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 GTF2H4Q92759 462 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 STMN2Q93045 179 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 UCN3Q969E3 161 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CIDECQ96AQ7 238 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 SLC22A18Q96BI1 424 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TESCQ96BS2 214 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 MS4A6EQ96DS6 147 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 DTNBP1Q96EV8 351 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 METTL2AQ96IZ6 378 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 ITCHQ96J02 903 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 DACH2Q96NX9 599 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TGM7Q96PF1 710 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TEFMQ96QE5 360 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 MNTQ99583 582 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SLC38A3Q99624 504 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 MAP3K3Q99759 626 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CITED2Q99967 270 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 C17orf62Q9BQA9 187 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 CPPED1Q9BRF8 314 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 CENPKQ9BS16 269 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SPXQ9BT56 116 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 DUSP26Q9BV47 211 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ITPAQ9BY32 194 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 IKZF5Q9H5V7 419 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 NANOGQ9H9S0 305 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PLEKHA2Q9HB19 425 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SPAG4Q9NPE6 437 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 STARD5Q9NSY2 213 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 LIN7CQ9NUP9 197 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 ATAD3AQ9NVI7 634 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TMEM45AQ9NWC5 275 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SLC25A37Q9NYZ2 338 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 AHSPQ9NZD4 102 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 VAPAQ9P0L0 249 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 SH3BP4Q9P0V3 963 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 C5AR2Q9P296 337 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 TMEM181Q9P2C4 612 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ABCD2Q9UBJ2 740 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 NKX1-2Q9UD57 310 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 CD300AQ9UGN4 299 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 IL19Q9UHD0 177 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PILRBQ9UKJ0 227 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 BAG5Q9UL15 447 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 PCDHGB4Q9UN71 923 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 AURKCQ9UQB9 309 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 POMPQ9Y244 141 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 MRPS2Q9Y399 296 aaKnown RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 L3MBTL1Q9Y468 752 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 RNF215Q9Y6U7 377 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 NCOA6Q14686 2063 aaPredicted RBP3.89□□□□□ -1.79
CD44-226ENST00000527889 FREM1Q5H8C1 2179 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 ARHGAP21Q5T5U3 1957 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 AKAP13Q12802 2813 aa3.89□□□□□ -1.79
CD44-226ENST00000527889 NBPF19A0A087WUL8 3843 aa3.88□□□□□ -1.79
CD44-226ENST00000527889 A0A096LPI6 279 aa3.88□□□□□ -1.79
CD44-226ENST00000527889 TRBV5-3A0A0A0MS03 114 aa3.88□□□□□ -1.79
CD44-226ENST00000527889 A0A0A6YYD5 115 aa3.88□□□□□ -1.79
CD44-226ENST00000527889 C15orf38-AP3S2A0A0A6YYH1 394 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms