RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 OSMP13725 252 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 UGT2B7P16662 529 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 CXCL2P19875 107 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 CALCRP30988 508 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 FEN1P39748 380 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 MAP3K8P41279 467 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 TTPAP49638 278 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 DGKEP52429 567 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 HMGA2P52926 109 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 SUCLG1P53597 346 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 WNT3P56703 355 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 BACE1P56817 501 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 GMFBP60983 142 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 SRSF11Q05519 484 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 POU4F2Q12837 409 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 MAP4K2Q12851 820 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 NAE1Q13564 534 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 RBMS2Q15434 407 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 TOMM34Q15785 309 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 ZRANB3Q5FWF4 1079 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 C12orf73Q69YU5 71 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 CD200R1LQ6Q8B3 271 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 CEACAM20Q6UY09 585 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 SHFQ7M4L6 423 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 MCEMP1Q8IX19 187 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 LINC01465Q8N7H1 131 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 OR4K2Q8NGD2 314 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 OR8J1Q8NGP2 316 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 HASPINQ8TF76 798 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 GLYATL2Q8WU03 294 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 ZNF296Q8WUU4 475 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 ING5Q8WYH8 240 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 C22orf15Q8WYQ4 148 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 ELMOD3Q96FG2 381 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 SPATA33Q96N06 139 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 ZNF385AQ96PM9 386 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 OR4K3Q96R72 315 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 DDOQ99489 341 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 SPSB2Q99619 263 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 COPS8Q99627 209 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 EGFL8Q99944 293 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 NKX6-2Q9C056 277 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 DUSP15Q9H1R2 295 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 NMNAT1Q9HAN9 279 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 TLR8Q9NR97 1041 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 CFAP97Q9P2B7 532 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 TBC1D29Q9UFV1 150 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 E9PI62 339 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 EEF1E1O43324 174 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 KDM4BO94953 1096 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 IFNA10P01566 189 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 ALDOBP05062 364 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 HIST1H2AGP0C0S8 130 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 GAAP10253 952 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 RNH1P13489 461 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 DRD2P14416 443 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 POU3F2P20265 443 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 HIST1H2ADP20671 130 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 PPIBP23284 216 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 RBMS1P29558 406 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 STAT5AP42229 794 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 GDF5P43026 501 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 XCR1P46094 333 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 SELENOPP49908 381 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 DEFA5Q01523 94 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 EIF4EBP2Q13542 120 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 HEPACAMQ14CZ8 416 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 TRAM1Q15629 374 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 KCNMB1Q16558 191 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 MICBQ29980 383 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 MPPE1Q53F39 396 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 B3GNTL1Q67FW5 361 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 HIST2H2AA3Q6FI13 130 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 RPUSD3Q6P087 351 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 LYPD4Q6UWN0 246 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 LRRC28Q86X40 367 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 CLECL1Q8IZS7 167 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 UMODL1-AS1Q8N2C9 162 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 DBF4BQ8NFT6 615 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 OR5T1Q8NG75 326 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 OR5M3Q8NGP4 307 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 OR2L8Q8NGY9 312 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 OR1S1Q8NH92 325 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 BBS10Q8TAM1 723 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 CMTM7Q96FZ5 175 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 HIST1H2AHQ96KK5 128 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 HIST1H2AJQ99878 128 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 SEMA3CQ99985 751 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 KCNK12Q9HB15 430 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 CYSLTR2Q9NS75 346 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 TMEM30AQ9NV96 361 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 FAM120CQ9NX05 1096 aaKnown RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 TEX10Q9NXF1 929 aaPredicted RBP7.03□□□□□ -1.28
SOX6-208ENST00000527619 OARD1Q9Y530 152 aa7.03□□□□□ -1.28
SOX6-208ENST00000527619 MCM3APO60318 1980 aa7.02□□□□□ -1.29
SOX6-208ENST00000527619 SERTM2A0A1B0GWG4 89 aa7.02□□□□□ -1.29
SOX6-208ENST00000527619 TMEM129A0AVI4 362 aa7.02□□□□□ -1.29
SOX6-208ENST00000527619 PLSCR5A0PG75 271 aa7.02□□□□□ -1.29
SOX6-208ENST00000527619 PRAMEF25A6NGN4 478 aa7.02□□□□□ -1.29
SOX6-208ENST00000527619 HEPACAM2A8MVW5 462 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms