RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CARD17Q5XLA6 110 aa6.86□□□□□ -1.31
CTNND1-216ENST00000527467 CNIH2Q6PI25 160 aa6.86□□□□□ -1.31
CTNND1-216ENST00000527467 BTNL8Q6UX41 500 aa6.86□□□□□ -1.31
CTNND1-216ENST00000527467 LDB1Q86U70 411 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-216ENST00000527467 TMEM104Q8NE00 496 aa6.86□□□□□ -1.31
CTNND1-216ENST00000527467 CYP2W1Q8TAV3 490 aa6.86□□□□□ -1.31
CTNND1-216ENST00000527467 TRMT2BQ96GJ1 504 aaKnown RBP6.86□□□□□ -1.31
CTNND1-216ENST00000527467 IGSF21Q96ID5 467 aa6.86□□□□□ -1.31
CTNND1-216ENST00000527467 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-216ENST00000527467 UTS2RQ9UKP6 389 aa6.86□□□□□ -1.31
CTNND1-216ENST00000527467 SCN7AQ01118 1682 aa6.86□□□□□ -1.31
CTNND1-216ENST00000527467 PEAK1Q9H792 1746 aa6.86□□□□□ -1.31
CTNND1-216ENST00000527467 A0A0U1RQF3 1178 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 LRRC10BA6NIK2 292 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 K7ERQ8 282 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 CLEC3BP05452 202 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 ZNF43P17038 809 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 MTNR1AP48039 350 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 MEOX1P50221 254 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 YBEYP58557 167 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 H3F3AP84243 136 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 AMZ1Q400G9 498 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 VASH1Q7L8A9 365 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 C11orf42Q8N5U0 333 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 HORMAD2Q8N7B1 307 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 KDF1Q8NAX2 398 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 CAMKVQ8NCB2 501 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 CMTM2Q8TAZ6 248 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 MARC2Q969Z3 335 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 LMF1Q96S06 567 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 FAM103A1Q9BTL3 118 aaKnown RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SLC25A51Q9H1U9 297 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 IL25Q9H293 177 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 TMEM134Q9H6X4 195 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 PSAT1Q9Y617 370 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SCN11AQ9UI33 1791 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 TRAV20A0A0B4J274 112 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SAP18O00422 153 aaKnown RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 PDGFBP01127 241 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 PCCBP05166 539 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 RD3LP0DJH9 198 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 AGXTP21549 392 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 HBG1P69891 147 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 HBG2P69892 147 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SORDQ00796 357 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 TAP2Q03519 686 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SNTB1Q13884 538 aaKnown RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 PCBP2Q15366 365 aaKnown RBP eCLIP6.85□□□□□ -1.318e-9■■■■□ 26.6
CTNND1-216ENST00000527467 FRG2Q64ET8 278 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 TMEM220Q6QAJ8 160 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 B3GNT9Q6UX72 402 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 LFNGQ8NES3 379 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 NDNFQ8TB73 568 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 C2CD4CQ8TF44 421 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SLC45A3Q96JT2 553 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 FRG2BQ96QU4 278 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SEC22CQ9BRL7 303 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 THAP7Q9BT49 309 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 NOX3Q9HBY0 568 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 BABAM2Q9NXR7 383 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 V9GYS6 101 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 METTL15A6NJ78 407 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 H7BYZ3 331 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SURF4O15260 269 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 PAGE1O75459 146 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 LYPLA2O95372 231 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 TYRP14679 529 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 HTR3AP46098 478 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 F2RL1P55085 397 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 HMGCS1Q01581 520 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 PIGFQ07326 219 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SLC25A52Q3SY17 297 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 HSF5Q4G112 596 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 EARS2Q5JPH6 523 aaKnown RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 RTL6Q6ICC9 239 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 LRP10Q7Z4F1 713 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 NPAS3Q8IXF0 933 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 C1orf52Q8N6N3 182 aaKnown RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 PLD5Q8N7P1 536 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 BPIFCQ8NFQ6 507 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 OR9A4Q8NGU2 314 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 OR5B3Q8NH48 314 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 TBC1D20Q96BZ9 403 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 OXSMQ9NWU1 459 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 RHCGQ9UBD6 479 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SLC2A6Q9UGQ3 507 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 SH3BGRL2Q9UJC5 107 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 FBXL4Q9UKA2 621 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 RIPK3Q9Y572 518 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 CEPT1Q9Y6K0 416 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 USP54Q70EL1 1684 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 GABRDO14764 452 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 ADAMTS4O75173 837 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 TTRP02766 147 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 PIM1P11309 404 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-216ENST00000527467 NME2P22392 152 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 CPT2P23786 658 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 CASP3P42574 277 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 AMTP48728 403 aa6.85□□□□□ -1.31
CTNND1-216ENST00000527467 RPL7AP62424 266 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms