RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 SURF4O15260 269 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 SLC16A4O15374 487 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 EFCAB14O75071 495 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 CSO75390 466 aaKnown RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 AP2A1O95782 977 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 VIPP01282 170 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ESR1P03372 595 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 IL5P05113 134 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 RHOP08100 348 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ANXA5P08758 320 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ZNF888P0CJ79 500 aaPredicted RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 SNHG28P0DPA3 235 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ZNF35P13682 527 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ADCYAP1P18509 176 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 GPD1P21695 349 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 GIFP27352 417 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 MPGP29372 298 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 AGTR1P30556 359 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PCGF2P35227 344 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 AVPR1AP37288 418 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 SOX3P41225 446 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 STAT5AP42229 794 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 GLP1RP43220 463 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 SOX8P57073 446 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 MRPS10P82664 201 aaKnown RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 HTRA3P83110 453 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PITPNAQ00169 270 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 SORDQ00796 357 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 MXD1Q05195 221 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 IL10RBQ08334 325 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ITKQ08881 620 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ACSM1Q08AH1 577 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TCP10Q12799 353 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PPP1R8Q12972 351 aaKnown RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 KCNMB1Q16558 191 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 HAGHQ16775 308 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 UGT8Q16880 541 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PLK5Q496M5 336 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 FNDC3BQ53EP0 1204 aaKnown RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 UNC50Q53HI1 259 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ZRANB3Q5FWF4 1079 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 CERCAMQ5T4B2 595 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TMEM244Q5VVB8 128 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 NSUN5P2Q63ZY6 315 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ABLIM2Q6H8Q1 611 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TBC1D3CQ6IPX1 549 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 SLC30A6Q6NXT4 461 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ZCCHC12Q6PEW1 402 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 OGFOD3Q6PK18 319 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TMEM91Q6ZNR0 172 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ASB18Q6ZVZ8 466 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ZNF765Q7L2R6 523 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ARMCX2Q7L311 632 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 P4HA3Q7Z4N8 544 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TMEM200AQ86VY9 491 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PARGQ86W56 976 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 KLHDC8BQ8IXV7 354 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 KIAA0319LQ8IZA0 1049 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 CDK20Q8IZL9 346 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TBC1D3Q8IZP1 549 aaPredicted RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 DAW1Q8N136 415 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 SYNPOQ8N3V7 929 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PGBD5Q8N414 524 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 CPXM2Q8N436 756 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TOMM5Q8N4H5 51 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 UBAC2Q8NBM4 344 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TMEM161BQ8NDZ6 487 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 OR9Q2Q8NGE9 314 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 OR8J2Q8NGG1 315 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 OR4K15Q8NH41 348 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TERB2Q8NHR7 220 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PCDH19Q8TAB3 1148 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 SNED1Q8TER0 1413 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 UBE2FQ969M7 185 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PNPLA2Q96AD5 504 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 LENG9Q96B70 501 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 NSUN4Q96CB9 384 aaKnown RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 FOXRED1Q96CU9 486 aaPredicted RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 PPM1MQ96MI6 270 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PTCHD1Q96NR3 888 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 OR4K3Q96R72 315 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 LMF1Q96S06 567 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 PEBP4Q96S96 227 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TEAD3Q99594 435 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 BARD1Q99728 777 aaKnown RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 MGME1Q9BQP7 344 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ACPTQ9BZG2 426 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 WDR11Q9BZH6 1224 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 GPR62Q9BZJ7 368 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 KCNK12Q9HB15 430 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 NT5MQ9NPB1 228 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 HEBP1Q9NRV9 189 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TMEM248Q9NWD8 314 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 MS4A12Q9NXJ0 267 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ZNF226Q9NYT6 803 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 TFCP2L1Q9NZI6 479 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 ZMYM5Q9UJ78 669 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 HACL1Q9UJ83 578 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 FBXL4Q9UKA2 621 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 CBLCQ9ULV8 474 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms