RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 A0A1B0GVC2 190 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 A0A1W2PPR1 153 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 FRG2CA6NGY1 282 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 HSPB2A8KAH6 182 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 B4DXG7 233 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 RFXANKO14593 260 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 SLC22A2O15244 555 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 PHF1O43189 567 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-204ENST00000526430 DYRK3O43781 588 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 IGHG3P01860 377 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 DDX5P17844 614 aaKnown RBP9.92□□□□□ -0.82
NEDD8-204ENST00000526430 ABCD3P28288 659 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 GABRA3P34903 492 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 PTGDSP41222 190 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 GZMMP51124 257 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 FUT5Q11128 374 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 SELPLGQ14242 412 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 LASP1Q14847 261 aaKnown RBP9.92□□□□□ -0.82
NEDD8-204ENST00000526430 HSPB2Q16082 182 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 NTRK2Q16620 822 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 RUNDC3AQ59EK9 446 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 C1orf185Q5T7R7 199 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 CDC73Q6P1J9 531 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 C8orf82Q6P1X6 216 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-204ENST00000526430 ZCCHC12Q6PEW1 402 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 ZNF621Q6ZSS3 439 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 OLIG3Q7RTU3 272 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 SNX32Q86XE0 403 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 SLC44A2Q8IWA5 706 aaPredicted RBP9.92□□□□□ -0.82
NEDD8-204ENST00000526430 PRR22Q8IZ63 422 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 SLC15A4Q8N697 577 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 POU5F2Q8N7G0 328 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 VPS37AQ8NEZ2 397 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 OR5D16Q8NGK9 328 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 SMPDL3BQ92485 455 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 PIK3R3Q92569 461 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 HSPBAP1Q96EW2 488 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 ITCHQ96J02 903 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 MS4A4EQ96PG1 132 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 OR7D2Q96RA2 312 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 GAL3ST4Q96RP7 486 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 SLC35A5Q9BS91 424 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 ACTRT3Q9BYD9 372 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 RTN4RQ9BZR6 473 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 DEFB127Q9H1M4 99 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 PIGUQ9H490 435 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 TPT1P8Q9HAU6 139 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 EQTNQ9NQ60 294 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 DEPPQ9NTK1 212 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 ARL8BQ9NVJ2 186 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.92□□□□□ -0.82
NEDD8-204ENST00000526430 FLRT3Q9NZU0 649 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 CFL2Q9Y281 166 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 PCNX3Q9H6A9 2034 aa9.92□□□□□ -0.82
NEDD8-204ENST00000526430 RNF103-CHMP3A0A140T963 221 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 PINLYPA6NC86 204 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 ACOT7O00154 380 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 HMGN4O00479 90 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 DVL2O14641 736 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 COQ9O75208 318 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 UGT2B11O75310 529 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 CNOT4O95628 575 aaKnown RBP9.91□□□□□ -0.82
NEDD8-204ENST00000526430 T-ENOLP0DO92 83 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 COX4I1P13073 169 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 GABRA1P14867 456 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 NAGAP17050 411 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 MATN1P21941 496 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 PIGAP37287 484 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 SSR4P51571 173 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 FBXW4P57775 412 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 PRR5P85299 388 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 DMTNQ08495 405 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 LRRC74AQ0VAA2 488 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 TP53BP2Q13625 1128 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 IL20RBQ6UXL0 311 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 APOOLQ6UXV4 268 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 RNF130Q86XS8 419 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 HIPK1Q86Z02 1210 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 CDRT4Q8N9R6 151 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 OR56A1Q8NGH5 318 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 FBXO27Q8NI29 283 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 RP9Q8TA86 221 aaKnown RBP9.91□□□□□ -0.82
NEDD8-204ENST00000526430 FBXO30Q8TB52 745 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 CDS1Q92903 461 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 TMBIM1Q969X1 311 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 MOAP1Q96BY2 351 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 OMA1Q96E52 524 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 NODALQ96S42 347 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 STACQ99469 402 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 OR51I1Q9H343 314 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 RMND5AQ9H871 391 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 KCNE5Q9UJ90 142 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 LEF1Q9UJU2 399 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-204ENST00000526430 CNOT11Q9UKZ1 510 aaKnown RBP9.91□□□□□ -0.82
NEDD8-204ENST00000526430 PCDHGB4Q9UN71 923 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 CHCHD2Q9Y6H1 151 aaPredicted RBP9.91□□□□□ -0.82
NEDD8-204ENST00000526430 CAPN7Q9Y6W3 813 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 NINQ8N4C6 2090 aa9.91□□□□□ -0.82
NEDD8-204ENST00000526430 YLPM1P49750 1951 aaKnown RBP9.9□□□□□ -0.82
NEDD8-204ENST00000526430 A8MVJ9 347 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms