RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 FARSBQ9NSD9 589 aaKnown RBP11.16□□□□□ -0.62
CCDC90B-205ENST00000525916 MED11Q9P086 117 aa11.16□□□□□ -0.62
CCDC90B-205ENST00000525916 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-205ENST00000525916 TIMM22Q9Y584 194 aa11.16□□□□□ -0.62
CCDC90B-205ENST00000525916 PCDHA9Q9Y5H5 950 aa11.16□□□□□ -0.62
CCDC90B-205ENST00000525916 PLCE1Q9P212 2302 aa11.16□□□□□ -0.62
CCDC90B-205ENST00000525916 HEATR1Q9H583 2144 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 C1orf226A1L170 272 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 NPIPB8E9PQR5 432 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 KLF11O14901 512 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 AZIN1O14977 448 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 ITM2AO43736 263 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 SSX4O60224 188 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 SNNO75324 88 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 ULK1O75385 1050 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 CD3EP07766 207 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 CSNK2A2P19784 350 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 EVI2BP34910 448 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 HTR6P50406 440 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 MAPK12P53778 367 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 CASP9P55211 416 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 CTBP2P56545 445 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 ABCE1P61221 599 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 CSTF3Q12996 717 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 STX3Q13277 289 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 GANABQ14697 944 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 TSC22D1Q15714 1073 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 UGT3A2Q3SY77 523 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 NCMAPQ5T1S8 102 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 KANK2Q63ZY3 851 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 BEND4Q6ZU67 534 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 TRIM46Q7Z4K8 759 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 GGNQ86UU5 652 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 ZNF619Q8N2I2 560 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 S100PBPQ96BU1 408 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 CNRIP1Q96F85 164 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 GMPPAQ96IJ6 420 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 SORT1Q99523 831 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 RHNO1Q9BSD3 238 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 PRRG4Q9BZD6 226 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 SHCBP1LQ9BZQ2 653 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 C20orf27Q9GZN8 174 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 C12orf49Q9H741 205 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 FOLH1BQ9HBA9 442 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 ZDHHC2Q9UIJ5 367 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 TRAF6Q9Y4K3 522 aa11.15□□□□□ -0.62
CCDC90B-205ENST00000525916 SVEP1Q4LDE5 3571 aa11.15□□□□□ -0.63
CCDC90B-205ENST00000525916 SHISA8B8ZZ34 492 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 SS18L1O75177 396 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 CD8AP01732 235 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 CHN1P15882 459 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 ZNF16P17020 682 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 PSMB1P20618 241 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 EIF1AXP47813 144 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 SLC1A6P48664 564 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 ALDH9A1P49189 494 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 PNLIPRP2P54317 469 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 BST1Q10588 318 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 ZNF672Q499Z4 452 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 HSP90B2PQ58FF3 399 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 CLEC6AQ6EIG7 209 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 PAGE2Q7Z2X7 111 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 OR4N2Q8NGD1 307 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 C1GALT1C1Q96EU7 318 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 VSTM2LQ96N03 204 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 TRAF4Q9BUZ4 470 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 ACPTQ9BZG2 426 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 RTN4RQ9BZR6 473 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 SHARPINQ9H0F6 387 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 OR10A4Q9H209 315 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 TUBB1Q9H4B7 451 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 ALG2Q9H553 416 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 MANSC1Q9H8J5 431 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 BARX1Q9HBU1 254 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 THAP1Q9NVV9 213 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 NMRK1Q9NWW6 199 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 TMEM160Q9NX00 188 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 FLRT3Q9NZU0 649 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 ADAM29Q9UKF5 820 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 GPR52Q9Y2T5 361 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 RAP2CQ9Y3L5 183 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 CCL27Q9Y4X3 112 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 DNAJC15Q9Y5T4 150 aa11.14□□□□□ -0.63
CCDC90B-205ENST00000525916 FAM234BA2RU67 622 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 LINC01387J3KSC0 135 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 EIF1AYO14602 144 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 GMFGO60234 142 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 CRCPO75575 148 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 LYPLA1O75608 230 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 NEFHP12036 1026 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 IL11P20809 199 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 PTNP21246 168 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 ZNF628Q5EBL2 1059 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 SGO1Q5FBB7 561 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 SH2D4BQ5SQS7 431 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 ATG16L1Q676U5 607 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 IL17RELQ6ZVW7 336 aa11.13□□□□□ -0.63
CCDC90B-205ENST00000525916 COMMD6Q7Z4G1 85 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms