RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 SNX8Q9Y5X2 465 aa10.62□□□□□ -0.71
SPARC-206ENST00000524277 A0A1W2PRB8 838 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 H3BNH8 94 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 AQP8O94778 261 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 KCNK2O95069 426 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 KRT16P08779 473 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 SDC1P18827 310 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 ELK4P28324 431 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 POU6F2P78424 691 aaPredicted RBP10.61□□□□□ -0.71
SPARC-206ENST00000524277 SLC18A2Q05940 514 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 RNPS1Q15287 305 aaKnown RBP10.61□□□□□ -0.71
SPARC-206ENST00000524277 PLPPR5Q32ZL2 321 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 CLEC6AQ6EIG7 209 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 MFSD12Q6NUT3 480 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 ZNF550Q7Z398 422 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 YTHDF3Q7Z739 585 aaKnown RBP10.61□□□□□ -0.71
SPARC-206ENST00000524277 COX18Q8N8Q8 333 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 ZNF527Q8NB42 609 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 SLC16A11Q8NCK7 471 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 B4GALNT2Q8NHY0 566 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 CIDECQ96AQ7 238 aaPredicted RBP10.61□□□□□ -0.71
SPARC-206ENST00000524277 ARSGQ96EG1 525 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 BTBD2Q9BX70 525 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 CXorf56Q9H5V9 222 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 GP6Q9HCN6 339 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 MED17Q9NVC6 651 aa10.61□□□□□ -0.71
SPARC-206ENST00000524277 ROS1P08922 2347 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 LSM1O15116 133 aaKnown RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 AKAP10O43572 662 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 LYPLA1O75608 230 aaPredicted RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 TUBBP07437 444 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 ACP2P11117 423 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 KRT4P19013 534 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 PSMB1P20618 241 aaKnown RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 ATP6V1C1P21283 382 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 PSMA4P25789 261 aaKnown RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 LOXP28300 417 aaPredicted RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 HPCAL1P37235 193 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 SUMO3P55854 103 aaPredicted RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 CARD18P57730 90 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 EXOC3L2Q2M3D2 409 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 CTU2Q2VPK5 515 aaKnown RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 RFTN2Q52LD8 501 aaPredicted RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 EXOSC6Q5RKV6 272 aaKnown RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 HBMQ6B0K9 141 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 PPP4R4Q6NUP7 873 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 STAC2Q6ZMT1 411 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 SZRD1Q7Z422 152 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 C10orf107Q8IVU9 208 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 STEAP2Q8NFT2 490 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 TMEM171Q8WVE6 324 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 UBLCP1Q8WVY7 318 aaPredicted RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 OSTF1Q92882 214 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 CPNE4Q96A23 557 aaPredicted RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 ARL8AQ96BM9 186 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 MOAP1Q96BY2 351 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 ZC3HAV1LQ96H79 300 aaKnown RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 PPP3R2Q96LZ3 170 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 KLHL15Q96M94 604 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 Q96MF0 132 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 RNF145Q96MT1 663 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 TSSK3Q96PN8 268 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 PRPF18Q99633 342 aaKnown RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 RHOXF2Q9BQY4 288 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 TACO1Q9BSH4 297 aaKnown RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 GATA5Q9BWX5 397 aaPredicted RBP10.6□□□□□ -0.71
SPARC-206ENST00000524277 PIGUQ9H490 435 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 TNFRSF12AQ9NP84 129 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 NGBQ9NPG2 151 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 ATAD3AQ9NVI7 634 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 ATP6V1HQ9UI12 483 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 DNAJC15Q9Y5T4 150 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 ACTL7BQ9Y614 415 aa10.6□□□□□ -0.71
SPARC-206ENST00000524277 HIVEP2P31629 2446 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 PCNX3Q9H6A9 2034 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.59□□□□□ -0.71
SPARC-206ENST00000524277 KLF4O43474 513 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 CXCL13O43927 109 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 NPHS1O60500 1241 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 LINC00032P0C843 101 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 SERPINB5P36952 375 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 SLC6A8P48029 635 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 RPL38P63173 70 aaKnown RBP10.59□□□□□ -0.71
SPARC-206ENST00000524277 DUSP5Q16690 384 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 LSM12Q3MHD2 195 aaKnown RBP10.59□□□□□ -0.71
SPARC-206ENST00000524277 ZNF385BQ569K4 471 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 TMEM201Q5SNT2 666 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 KANK2Q63ZY3 851 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 ANKRD34AQ69YU3 496 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 ANKRD26P1Q6NSI1 321 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 BHLHB9Q6PI77 547 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 FIGNL1Q6PIW4 674 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 ZNF704Q6ZNC4 412 aaPredicted RBP10.59□□□□□ -0.71
SPARC-206ENST00000524277 SSX8Q7RTT4 187 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 GALNT10Q86SR1 603 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 LILRA2Q8N149 483 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 ZNF611Q8N823 705 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 OR56A1Q8NGH5 318 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 PSMA8Q8TAA3 256 aa10.59□□□□□ -0.71
SPARC-206ENST00000524277 PPP1R14CQ8TAE6 165 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms