RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	RHBG	Q9H310	441 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR51B5	Q9H339	312 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ANKRA2	Q9H9E1	313 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	PELI2	Q9HAT8	420 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	B3GAT2	Q9NPZ5	323 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	RBFOX1	Q9NWB1	397 aa	Known RBP	7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	DKK3	Q9UBP4	350 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	IL36A	Q9UHA7	158 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	MKL2	Q9ULH7	1088 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMCC3	Q9ULS5	477 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	RAX	Q9Y2V3	346 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	YARS2	Q9Y2Z4	477 aa	Known RBP	7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	ASB4	Q9Y574	426 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	PCDHGB7	Q9Y5F8	929 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	PCDHGA1	Q9Y5H4	931 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	PKD1L2	Q7Z442	2459 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	RALGAPA1	Q6GYQ0	2036 aa		7.3	□□□□□ -1.24
SPIDR-223	ENST00000524033	SPAG17	Q6Q759	2223 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	IGSF10	Q6WRI0	2623 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	FABP12	A6NFH5	140 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	HMGN4	O00479	90 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	PLPP1	O14494	284 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	PDPK1	O15530	556 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	PRODH	O43272	600 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	EIF4EBP3	O60516	100 aa	Predicted RBP	7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	LEFTY1	O75610	366 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	RFPL3	O75679	317 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	UBXN7	O94888	489 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	PCDH8	O95206	1070 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	TGFB1	P01137	390 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	GBA	P04062	536 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	KLK1	P06870	262 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	LIMS3	P0CW19	117 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	LIMS4	P0CW20	117 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	THEGL	P0DJG4	465 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	HK1	P19367	917 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	GAL	P22466	123 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	POU1F1	P28069	291 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ACADL	P28330	430 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	EPHA8	P29322	1005 aa	Predicted RBP	7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	AKT2	P31751	481 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	SDC2	P34741	201 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	BSG	P35613	385 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ETV3	P41162	512 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	P2RX3	P56373	397 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ARPC4	P59998	168 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	POLR2L	P62875	67 aa	Known RBP	7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	REEP5	Q00765	189 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	FABP5	Q01469	135 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	TAP2	Q03519	686 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	RAB40B	Q12829	278 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	FAP	Q12884	760 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF155	Q12901	538 aa	Predicted RBP	7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZNF284	Q2VY69	593 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	KLHL22	Q53GT1	634 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	VASN	Q6EMK4	673 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	LAMTOR1	Q6IAA8	161 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	C22orf42	Q6IC83	251 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ACSM5	Q6NUN0	579 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	PODNL1	Q6PEZ8	512 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	CASP12	Q6UXS9	341 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	LIPI	Q6XZB0	460 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ERN2	Q76MJ5	926 aa	Known RBP	7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	RBM45	Q8IUH3	476 aa	Known RBP	7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	NRSN1	Q8IZ57	195 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC25A45	Q8N413	288 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	TBC1D19	Q8N5T2	526 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	IQCF1	Q8N6M8	205 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	YIPF7	Q8N8F6	280 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	SYT14	Q8NB59	555 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ZSCAN1	Q8NBB4	408 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	TMEM145	Q8NBT3	493 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	OR8D4	Q8NGM9	314 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC7A13	Q8TCU3	470 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	HCAR2	Q8TDS4	363 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	SMPDL3A	Q92484	453 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	UBE2E3	Q969T4	207 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ARRDC3	Q96B67	414 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	TM4SF18	Q96CE8	201 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	MED30	Q96HR3	178 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	LINC00615	Q96LM1	132 aa	Predicted RBP	7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	PRRC1	Q96M27	445 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	COQ10A	Q96MF6	247 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	KCTD7	Q96MP8	289 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	FOPNL	Q96NB1	174 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	UBL7	Q96S82	380 aa	Predicted RBP	7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	KCNJ15	Q99712	375 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	GPA33	Q99795	319 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	COQ7	Q99807	217 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ATF6B	Q99941	703 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	MARVELD1	Q9BSK0	173 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	MS4A8	Q9BY19	250 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	SLC17A9	Q9BYT1	436 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	RNF32	Q9H0A6	362 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	NT5DC2	Q9H857	520 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	LHX9	Q9NQ69	397 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	SEMA3G	Q9NS98	782 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	ACSS1	Q9NUB1	689 aa	Predicted RBP	7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	DKK4	Q9UBT3	224 aa		7.29	□□□□□ -1.24
SPIDR-223	ENST00000524033	PHF11	Q9UIL8	331 aa		7.29	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms