RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 FAM9CQ8IZT9 166 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 SLC35F6Q8N357 371 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 PPM1NQ8N819 430 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 ZNF610Q8N9Z0 462 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 STEAP2Q8NFT2 490 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 CDC26Q8NHZ8 85 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 PPP1R14CQ8TAE6 165 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 FNDC9Q8TBE3 224 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 FIG4Q92562 907 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 EFHD2Q96C19 240 aaPredicted RBP5.59□□□□□ -1.51
PABPC1-220ENST00000522658 ADAD1Q96M93 576 aaKnown RBP5.59□□□□□ -1.51
PABPC1-220ENST00000522658 FRG2BQ96QU4 278 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 BBS4Q96RK4 519 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 RHNO1Q9BSD3 238 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 LRRC1Q9BTT6 524 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 BEX2Q9BXY8 128 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 MRPL1Q9BYD6 325 aaKnown RBP5.59□□□□□ -1.51
PABPC1-220ENST00000522658 REG4Q9BYZ8 158 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 SHARPINQ9H0F6 387 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 DSN1Q9H410 356 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 Q9N2J8 555 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 MAT2BQ9NZL9 334 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 LPAR3Q9UBY5 353 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 POU2F3Q9UKI9 436 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 UTS2RQ9UKP6 389 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 SNX12Q9UMY4 172 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 SNX6Q9UNH7 406 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 ABCG2Q9UNQ0 655 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 ACOT9Q9Y305 439 aa5.59□□□□□ -1.51
PABPC1-220ENST00000522658 MAP1AP78559 2803 aaPredicted RBP5.59□□□□□ -1.51
PABPC1-220ENST00000522658 NSD1Q96L73 2696 aaPredicted RBP5.59□□□□□ -1.52
PABPC1-220ENST00000522658 MPDZO75970 2070 aa5.59□□□□□ -1.52
PABPC1-220ENST00000522658 NINQ8N4C6 2090 aa5.59□□□□□ -1.52
PABPC1-220ENST00000522658 CHD3Q12873 2000 aaKnown RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 KIAA1549Q9HCM3 1950 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 FN1P02751 2386 aaKnown RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 CSPG4Q6UVK1 2322 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 WASHC1A8K0Z3 465 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 CCDC188H7C350 402 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 EIF3HO15372 352 aaKnown RBP eCLIP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 PHF1O43189 567 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 GMFGO60234 142 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 PIAS1O75925 651 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 TUBBP07437 444 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 GSTA2P09210 222 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 PABPC4LP0CB38 370 aaKnown RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 FAM157CP0CG43 387 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 HPGDP15428 266 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 EPORP19235 508 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 DRD5P21918 477 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 VAMP1P23763 118 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 CDKN1AP38936 164 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 ZNF41P51814 821 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 PNLIPRP2P54317 469 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 CASP9P55211 416 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 CDH11P55287 796 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 CLDN15P56746 228 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 MRPS35P82673 323 aaKnown RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 MAP4K2Q12851 820 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 E2F2Q14209 437 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 HEPACAMQ14CZ8 416 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 ZKSCAN8Q15776 578 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 STK11Q15831 433 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 NRF1Q16656 503 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 PRICKLE4Q2TBC4 344 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 METTL2BQ6P1Q9 378 aaKnown RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 CRIP3Q6Q6R5 217 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 FAM111BQ6SJ93 734 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 C3orf62Q6ZUJ4 267 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 SH2D5Q6ZV89 423 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 SZRD1Q7Z422 152 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 COMMD6Q7Z4G1 85 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 METTL25Q8N6Q8 603 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 WDSUB1Q8N9V3 476 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 OR52B6Q8NGF0 335 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 RHEBL1Q8TAI7 183 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 UHMK1Q8TAS1 419 aaKnown RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 SELENOMQ8WWX9 145 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 EXOSC8Q96B26 276 aaKnown RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 CTHRC1Q96CG8 243 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 ERP27Q96DN0 273 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 MTBPQ96DY7 904 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 PHF21BQ96EK2 531 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 SLC35A4Q96G79 324 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 GMPPAQ96IJ6 420 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 BTBD9Q96Q07 612 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 ATOH8Q96SQ7 321 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 SHCBP1LQ9BZQ2 653 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 OR10A4Q9H209 315 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 NOL11Q9H8H0 719 aaKnown RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 RNF122Q9H9V4 155 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 FOLH1BQ9HBA9 442 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 C3orf14Q9HBI5 128 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 TIGARQ9NQ88 270 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 GLRX2Q9NS18 164 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 ZNF701Q9NV72 531 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 XPR1Q9UBH6 696 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 HEY2Q9UBP5 337 aa5.58□□□□□ -1.52
PABPC1-220ENST00000522658 TMEFF2Q9UIK5 374 aaPredicted RBP5.58□□□□□ -1.52
PABPC1-220ENST00000522658 TMCO1Q9UM00 188 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms