RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RGRP47804 291 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 NPBWR2P48146 333 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 OR1D5P58170 312 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 UBE2G2P60604 165 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 BTG1P62324 171 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 LCN2P80188 198 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SNTA1Q13424 505 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 DGCR6Q14129 220 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 VGLL4Q14135 290 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 DMC1Q14565 340 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ZNF268Q14587 947 aaPredicted RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 PON2Q15165 354 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 MAPRE2Q15555 327 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 VPS26BQ4G0F5 336 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 TP53I3Q53FA7 332 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 XKR4Q5GH76 650 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 LY6G6FQ5SQ64 297 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PRAMEF17Q5VTA0 474 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 RNLSQ5VYX0 342 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ACSM5Q6NUN0 579 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ENPP6Q6UWR7 440 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ARCQ7LC44 396 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PID1Q7Z2X4 250 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 PIWIL4Q7Z3Z4 852 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 ABHD12BQ7Z5M8 362 aaPredicted RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 AMIGO2Q86SJ2 522 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 NUDCD3Q8IVD9 361 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 RNF113BQ8IZP6 322 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 MAPKAPK5-AS1Q8N8E1 139 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 C8orf31Q8N9H6 132 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 CYB561A3Q8NBI2 242 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 OR7A2PQ8NGA2 310 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 OR5L2Q8NGL0 311 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 OR4A4PQ8NGN8 299 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 OR1B1Q8NGR6 318 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 OR1J1Q8NGS3 322 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 MAGEE2Q8TD90 523 aaPredicted RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 HTR3CQ8WXA8 447 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 NAT6Q93015 286 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ABTB1Q969K4 478 aaPredicted RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 PNPLA2Q96AD5 504 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 CCDC124Q96CT7 223 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 FAM122AQ96E09 287 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SLC6A7Q99884 636 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 APOOQ9BUR5 198 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 CHID1Q9BWS9 393 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SHARPINQ9H0F6 387 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 ZCCHC4Q9H5U6 513 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 EGLN3Q9H6Z9 239 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 NMRAL1Q9HBL8 299 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 AURKAIP1Q9NWT8 199 aaPredicted RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 MRPL39Q9NYK5 338 aaKnown RBP3.55□□□□□ -1.84
SKP1-209ENST00000522552 MBD2Q9UBB5 411 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 CYTH4Q9UIA0 394 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 WIPI2Q9Y4P8 454 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 WDR17Q8IZU2 1322 aa3.55□□□□□ -1.84
SKP1-209ENST00000522552 SPATA31D1Q6ZQQ2 1576 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 LILRA5A6NI73 299 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 PRRG2O14669 202 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 ITGB1BP1O14713 200 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 ZBTB5O15062 677 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 ZNHIT1O43257 154 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 CHST1O43916 411 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 KIAA0513O60268 411 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 ZNF623O75123 536 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 PDE5AO76074 875 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 BRI3O95415 125 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 F10P00742 488 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 IFNA2P01563 188 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 NR3C1P04150 777 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 H2BFMP0C1H6 154 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 IGHV4-31P0DP07 118 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 HOXB8P17481 243 aaPredicted RBP3.54□□□□□ -1.84
SKP1-209ENST00000522552 AADACP22760 399 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 SSTR2P30874 369 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 CCKBRP32239 447 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 PGFP49763 221 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 FHITP49789 147 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 STK19P49842 368 aaPredicted RBP3.54□□□□□ -1.84
SKP1-209ENST00000522552 DNA2P51530 1060 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 BACE1P56817 501 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 RAB10P61026 200 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 SEC61A1P61619 476 aaKnown RBP3.54□□□□□ -1.84
SKP1-209ENST00000522552 TUBA1BP68363 451 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 NTHL1P78549 312 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 BASP1P80723 227 aaKnown RBP3.54□□□□□ -1.84
SKP1-209ENST00000522552 SELENBP1Q13228 472 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 SLC25A52Q3SY17 297 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 TMEM52BQ4KMG9 183 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 BEND3Q5T5X7 828 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 C1orf189Q5VU69 101 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 ULK3Q6PHR2 472 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 PARM1Q6UWI2 310 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 CCNI2Q6ZMN8 369 aaPredicted RBP3.54□□□□□ -1.84
SKP1-209ENST00000522552 TUBA1AQ71U36 451 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 ZNF554Q86TJ5 538 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 MARCH9Q86YJ5 346 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 CNGA4Q8IV77 575 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 CCDC50Q8IVM0 306 aa3.54□□□□□ -1.84
SKP1-209ENST00000522552 LRRC34Q8IZ02 419 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms