RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	CCDC28B	Q9BUN5	200 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	UCK2	Q9BZX2	261 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	PRDM14	Q9GZV8	571 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TMEM185B	Q9H7F4	350 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	RMND5A	Q9H871	391 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SDR39U1	Q9NRG7	319 aa	Predicted RBP	7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SLC6A13	Q9NSD5	602 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CCDC167	Q9P0B6	97 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941		Q9UFV3	132 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CARD8	Q9Y2G2	431 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	WDR45	Q9Y484	360 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	DOPEY1	Q5JWR5	2465 aa		7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ASH1L	Q9NR48	2969 aa	Known RBP	7.58	□□□□□ -1.2
CTNNA1-231	ENST00000521941		A0A1W2PQD3	144 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FAM234B	A2RU67	622 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	OR2M5	A3KFT3	312 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	AHRR	A9YTQ3	701 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941		H0YC42	278 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941		H3BNH8	94 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	C19orf84	I3L1E1	186 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	HMGN4	O00479	90 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZIC3	O60481	467 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FCMR	O60667	390 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	STX11	O75558	287 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	AK1	P00568	194 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	OPN1LW	P04000	364 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	NGFR	P08138	427 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	VIM	P08670	466 aa	Known RBP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TROVE2	P10155	538 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	UBL4A	P11441	157 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CHRNB4	P30926	498 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LCN1	P31025	176 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CRAT	P43155	626 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LHX2	P50458	406 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ANXA11	P50995	505 aa	Known RBP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	AGFG1	P52594	562 aa	Known RBP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ATP12A	P54707	1039 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TPD52	P55327	224 aa	Predicted RBP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	GFRA1	P56159	465 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	GUCY1A3	Q02108	690 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZNF117	Q03924	483 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FUT5	Q11128	374 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ART3	Q13508	389 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SQLE	Q14534	574 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SYPL1	Q16563	259 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZNF630	Q2M218	657 aa	Predicted RBP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ARHGAP11B	Q3KRB8	267 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	NHSL2	Q5HYW2	709 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SEM1	Q6ZVN7	128 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CHMP1B	Q7LBR1	199 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	P4HA3	Q7Z4N8	544 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	GRAMD2A	Q8IUY3	354 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	MISP	Q8IVT2	679 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CHDH	Q8NE62	594 aa	Predicted RBP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TNIP2	Q8NFZ5	429 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	GOT1L1	Q8NHS2	421 aa	Predicted RBP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ROPN1L	Q96C74	230 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SPDL1	Q96EA4	605 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	RNF145	Q96MT1	663 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	NPAS1	Q99742	590 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TMEM120A	Q9BXJ8	343 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	QRSL1	Q9H0R6	528 aa	Known RBP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	MED17	Q9NVC6	651 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FGFR1OP2	Q9NVK5	253 aa		7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	USP9Y	O00507	2555 aa	Predicted RBP	7.57	□□□□□ -1.2
CTNNA1-231	ENST00000521941	UTP20	O75691	2785 aa	Known RBP	7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	IGLV3-32	A0A0A0MS00	114 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	PRAMEF27	A3QJZ7	478 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CLCA1	A8K7I4	914 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	EIF1AY	O14602	144 aa	Known RBP	7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	KIAA0513	O60268	411 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	TOX	O94900	526 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	SOX30	O94993	753 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	H6PD	O95479	791 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	KRT75	O95678	551 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	AGR2	O95994	175 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CSTA	P01040	98 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	IL2RA	P01589	272 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	BCHE	P06276	602 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	HOXD4	P09016	255 aa	Predicted RBP	7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	UBTFL6	P0CB48	400 aa	Predicted RBP	7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	NR2F1	P10589	423 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	PEPD	P12955	493 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ETFA	P13804	333 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CD1E	P15812	388 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	ZNF708	P17019	499 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CAPN3	P20807	821 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	AGA	P20933	346 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	BMP5	P22003	454 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CHM	P24386	653 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	PTGER4	P35408	488 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	P2RX1	P51575	399 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CLDN18	P56856	261 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CLDN20	P56880	219 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	B3GALT5-AS1	P59052	145 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	CHRNE	Q04844	493 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	LRRC74A	Q0VAA2	488 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	FOXF1	Q12946	379 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	PLPPR5	Q32ZL2	321 aa		7.56	□□□□□ -1.2
CTNNA1-231	ENST00000521941	RIPPLY2	Q5TAB7	128 aa		7.56	□□□□□ -1.2

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