RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PRKAR1BP31321 381 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 MAN2A2P49641 1150 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 CSTF1Q05048 431 aaKnown RBP9.46□□□□□ -0.89
MCF2-209ENST00000520602 QPRTQ15274 297 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 PGGHGQ32M88 737 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 ZNF836Q6ZNA1 936 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 PLEKHG7Q6ZR37 379 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 ZNF550Q7Z398 422 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 FAM220AQ7Z4H9 259 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 BAHD1Q8TBE0 780 aaPredicted RBP9.46□□□□□ -0.89
MCF2-209ENST00000520602 TRIM36Q9NQ86 728 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 CLEC1BQ9P126 229 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 CMAHPQ9Y471 501 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 PCDHGB6Q9Y5F9 930 aa9.46□□□□□ -0.89
MCF2-209ENST00000520602 FAM171A2A8MVW0 826 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 PLOD3O60568 738 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 TFPIP10646 304 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 MAOAP21397 527 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 CD40LGP29965 261 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 GRPRP30550 384 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 HMGA2P52926 109 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 ZIC1Q15915 447 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 ZNF425Q6IV72 752 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 MZT2BQ6NZ67 158 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 RAB43Q86YS6 212 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 ZNF527Q8NB42 609 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 SIMC1Q8NDZ2 872 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 OR52I1Q8NGK6 324 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 DYNC2LI1Q8TCX1 351 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 CNOT9Q92600 299 aaKnown RBP9.46□□□□□ -0.9
MCF2-209ENST00000520602 ZFP3Q96NJ6 502 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 OR2A5Q96R48 311 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 DOK1Q99704 481 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 WFDC6Q9BQY6 131 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 G6PC3Q9BUM1 346 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 PLA2G12AQ9BZM1 189 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 C14orf105Q9NVL8 296 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 TBCCD1Q9NVR7 557 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 SLC22A7Q9Y694 548 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 ALPK2Q86TB3 2170 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 C17orf105B2RV13 164 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 M0R082 166 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 SOCS6O14544 535 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 FUT1P19526 365 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 PSMD4P55036 377 aaKnown RBP9.46□□□□□ -0.9
MCF2-209ENST00000520602 RAB25P57735 213 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 EEF1A2Q05639 463 aaKnown RBP9.46□□□□□ -0.9
MCF2-209ENST00000520602 GRM7Q14831 915 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 NSDHLQ15738 373 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 CCBE1Q6UXH8 406 aaPredicted RBP9.46□□□□□ -0.9
MCF2-209ENST00000520602 GID4Q8IVV7 300 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 SPRYD4Q8WW59 207 aaPredicted RBP9.46□□□□□ -0.9
MCF2-209ENST00000520602 TMCO6Q96DC7 493 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 VMP1Q96GC9 406 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 SERTAD3Q9UJW9 196 aa9.46□□□□□ -0.9
MCF2-209ENST00000520602 TDRD6O60522 2096 aaKnown RBP9.46□□□□□ -0.9
MCF2-209ENST00000520602 A0A1W2PQL4 384 aaPredicted RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 XKRYO14609 159 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 DPM1O60762 260 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 TBX19O60806 448 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 DNAJB6O75190 326 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 SLC2A10O95528 541 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 CFIP05156 583 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ACP2P11117 423 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 HOXB9P17482 250 aaPredicted RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 RAB40BQ12829 278 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 SRSF5Q13243 272 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 TDGQ13569 410 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 RASSF6Q6ZTQ3 369 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 RASGRP3Q8IV61 690 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 PARP16Q8N5Y8 322 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 METTL21AQ8WXB1 218 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ZMYND19Q96E35 227 aaPredicted RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 ZNF559Q9BR84 538 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 SIDT1Q9NXL6 827 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 DHCR7Q9UBM7 475 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 FTSJ1Q9UET6 329 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 PRODH2Q9UF12 536 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 GNG8Q9UK08 70 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 PLCL2Q9UPR0 1127 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 PCDHGB1Q9Y5G3 927 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 A0A1W2PRG6 482 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ARHGEF9O43307 516 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 MT-ND5P03915 603 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 CXCR1P25024 350 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ARRB1P49407 418 aaPredicted RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 OR2B6P58173 313 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 SNRPGP62308 76 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 EIF2B5Q13144 721 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 CBX3Q13185 183 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ODF4Q2M2E3 257 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 Q6ZNX1 250 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ASB18Q6ZVZ8 466 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 TDHQ8IZJ6 230 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 ARL14Q8N4G2 192 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 PFN4Q8NHR9 129 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 FKBP10Q96AY3 582 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 SHDQ96IW2 340 aa9.45□□□□□ -0.9
MCF2-209ENST00000520602 GFM1Q96RP9 751 aaKnown RBP9.45□□□□□ -0.9
MCF2-209ENST00000520602 SEMA6CQ9H3T2 930 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms