RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 TMED10P49755 219 aaKnown RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 NDST2P52849 883 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SNU13P55769 128 aaKnown RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 NUP107P57740 925 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ST8SIA6P61647 398 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 B2MP61769 119 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 IL9RQ01113 521 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 MS4A2Q01362 244 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 CAV1Q03135 178 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 YWHAHQ04917 246 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 DNAJC3Q13217 504 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 STX3Q13277 289 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RAPSNQ13702 412 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 DPYSQ14117 519 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 MAPK11Q15759 364 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 MOGQ16653 247 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 QSER1Q2KHR3 1735 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 MS4A18Q3C1V0 323 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 LRRC37A5PQ49AS3 106 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 IQCCQ4KMZ1 466 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 HSP90AA5PQ58FG0 334 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RABGAP1LQ5R372 815 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM182AQ5T1J6 154 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 PLPP4Q5VZY2 271 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 CTRB2Q6GPI1 263 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 PM20D1Q6GTS8 502 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ANKRD26P1Q6NSI1 321 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 PPP1R2P3Q6NXS1 205 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 LINC00299Q6ZSB3 139 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 Q6ZVQ6 151 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RFPL4BQ6ZWI9 263 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZNF677Q86XU0 584 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 CPNE9Q8IYJ1 553 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 DND1Q8IYX4 353 aaKnown RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 CLYBLQ8N0X4 340 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 DAW1Q8N136 415 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 UBL4BQ8N7F7 174 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 AQP11Q8NBQ7 271 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RNF149Q8NC42 400 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 OR9Q2Q8NGE9 314 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 C11orf45Q8TAV5 145 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 NPRL2Q8WTW4 380 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 U2AF1L4Q8WU68 220 aaKnown RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 FAM151AQ8WW52 585 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 TRUB1Q8WWH5 349 aaKnown RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SHC3Q92529 594 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 TMIGD2Q96BF3 282 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZBED3Q96IU2 234 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 GAL3ST4Q96RP7 486 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RASL10BQ96S79 203 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ATOH8Q96SQ7 321 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 DHRS9Q9BPW9 319 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLC39A3Q9BRY0 314 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 OSBPL8Q9BZF1 889 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 NMUR2Q9GZQ4 415 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 DRC3Q9H069 523 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 EHD1Q9H4M9 534 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SIAEQ9HAT2 523 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 PARVBQ9HBI1 364 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 FBXO6Q9NRD1 293 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 MRGBPQ9NV56 204 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 FKBP14Q9NWM8 211 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 IL20Q9NYY1 176 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SENP1Q9P0U3 644 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 GCNT4Q9P109 453 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 PAK5Q9P286 719 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RABL2AQ9UBK7 228 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RSL24D1Q9UHA3 163 aaKnown RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RIMS3Q9UJD0 308 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 KIAA1257Q9ULG3 409 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 EXOC7Q9UPT5 735 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 PRELID1Q9Y255 219 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 MRPS18CQ9Y3D5 142 aaKnown RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 UBIAD1Q9Y5Z9 338 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 STYXL1Q9Y6J8 313 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 ZFP37Q9Y6Q3 630 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SLX4Q8IY92 1834 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 NHSQ6T4R5 1651 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RGPD3A6NKT7 1758 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 RGPD4Q7Z3J3 1758 aa2.72□□□□□ -1.97
HMGB1P41-201ENST00000520234 SF3B1O75533 1304 aaKnown RBP eCLIP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 LRRC37AA6NMS7 1700 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 OTOFQ9HC10 1997 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 FOCADQ5VW36 1801 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 IGHV3-38A0A0C4DH36 116 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 C13orf42A0A1B0GVH6 325 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 FAM149AA5PLN7 773 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 OR5K4A6NMS3 321 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 RSPH10B2B2RC85 870 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 G3V2L1 256 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 H0YCG3 227 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 TMX2-CTNND1H3BSU7 103 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 M0R296 226 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 DLGAP1O14490 977 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 INPP4BO15327 924 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 GYG2O15488 501 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 NDUFA2O43678 99 aa2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 SNNO75324 88 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P41-201ENST00000520234 CRCPO75575 148 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms