RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 HMGCS2P54868 508 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 BLOC1S1P78537 153 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 SERINC3Q13530 473 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF385BQ569K4 471 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 FAM76BQ5HYJ3 339 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 GPR32P1Q8NGA4 272 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 TEFMQ96QE5 360 aaKnown RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 ORAI3Q9BRQ5 295 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 WRAP53Q9BUR4 548 aaKnown RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 SMG9Q9H0W8 520 aaKnown RBP12.68□□□□□ -0.38
PABPC1-208ENST00000519004 ANGPT4Q9Y264 503 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 MAP4K5Q9Y4K4 846 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 PLXNB2O15031 1838 aa12.68□□□□□ -0.38
PABPC1-208ENST00000519004 F5H5P2 479 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 RNASET2O00584 256 aaKnown RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 PHYHO14832 338 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 SNRPBP14678 240 aaKnown RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 KCNE1P15382 129 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 DGKAP23743 735 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 MMP11P24347 488 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 BDKRB2P30411 391 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 MECP2P51608 486 aaKnown RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 STARD6P59095 220 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 LINC00303Q3SY05 128 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 ZNF805Q5CZA5 627 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 DCAF12L2Q5VW00 463 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 CD300LDQ6UXZ3 194 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 OR2W3Q7Z3T1 314 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 RBM45Q8IUH3 476 aaKnown RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 NKAIN4Q8IVV8 208 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 MTMR14Q8NCE2 650 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 CHST13Q8NET6 341 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 WDR13Q9H1Z4 485 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 ISG20L2Q9H9L3 353 aaKnown RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 PLEKHA1Q9HB21 404 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 CACNG4Q9UBN1 327 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 NAP1L6A6NFF2 107 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 NME6O75414 186 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 STX11O75558 287 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 IGHA1P01876 353 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 RGRP47804 291 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 RAE1P78406 368 aaKnown RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 LSM11P83369 360 aaKnown RBP eCLIP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 IL10RAQ13651 578 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 CSRP2Q16527 193 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 HEPHL1Q6MZM0 1159 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 ZCCHC12Q6PEW1 402 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 APOOLQ6UXV4 268 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 GOT1L1Q8NHS2 421 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 STK35Q8TDR2 534 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 GMLQ99445 158 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 BOCQ9BWV1 1114 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 ADGRE3Q9BY15 652 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 ALX4Q9H161 411 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 ACAD8Q9UKU7 415 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 RUVBL1Q9Y265 456 aaKnown RBP12.67□□□□□ -0.38
PABPC1-208ENST00000519004 PRSS21Q9Y6M0 314 aa12.67□□□□□ -0.38
PABPC1-208ENST00000519004 PCNTO95613 3336 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 PATJQ8NI35 1801 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 C9orf170A2RU37 121 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 C1orf196B1AJZ1 125 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 TERTO14746 1132 aaKnown RBP12.66□□□□□ -0.38
PABPC1-208ENST00000519004 PRAMEF11O60813 436 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 SLC25A12O75746 678 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 SLC25A14O95258 325 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-208ENST00000519004 ABOP16442 354 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 NDUFB7P17568 137 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 LAP3P28838 519 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 SLC11A2P49281 568 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 CDH11P55287 796 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 PEA15Q15121 130 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 PON3Q15166 354 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 XKR4Q5GH76 650 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 FAM180BQ6P0A1 224 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 RNF113BQ8IZP6 322 aaKnown RBP12.66□□□□□ -0.38
PABPC1-208ENST00000519004 OR4K1Q8NGD4 311 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 OR4D11Q8NGI4 311 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 CD99L2Q8TCZ2 262 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 GCDHQ92947 438 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-208ENST00000519004 IGSF8Q969P0 613 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 C14orf144Q96I85 54 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 WFDC6Q9BQY6 131 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 TRIM62Q9BVG3 475 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 EGLN1Q9GZT9 426 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.66□□□□□ -0.382e-7■■■□□ 16.8
PABPC1-208ENST00000519004 TCF7L1Q9HCS4 588 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 ATXN7L1Q9ULK2 861 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-208ENST00000519004 OR6C76A6NM76 312 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 E9PI62 339 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 H7C0S8 307 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 PGRMC2O15173 223 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 RAMP2O60895 175 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 C6orf47O95873 294 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 ANXA5P08758 320 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 HOXC4P09017 264 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-208ENST00000519004 VSIG10L2P0DP72 767 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 RNF144AP50876 292 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-208ENST00000519004 PPT1P50897 306 aa12.66□□□□□ -0.38
PABPC1-208ENST00000519004 NUBP1P53384 320 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms