RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 ZNF836Q6ZNA1 936 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.02□□□□□ -0.97
CLN8-202ENST00000517514 FADS6Q8N9I5 356 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 ZFP62Q8NB50 900 aaPredicted RBP9.02□□□□□ -0.97
CLN8-202ENST00000517514 OR52P1PQ8NH57 321 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 DUSP19Q8WTR2 217 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 CNOT9Q92600 299 aaKnown RBP9.02□□□□□ -0.97
CLN8-202ENST00000517514 PMM1Q92871 262 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 TMCO6Q96DC7 493 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 TMEM41AQ96HV5 264 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 KCTD14Q9BQ13 255 aaPredicted RBP9.02□□□□□ -0.97
CLN8-202ENST00000517514 THTPAQ9BU02 230 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 HOXD1Q9GZZ0 328 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 METTL7AQ9H8H3 244 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 RLIMQ9NVW2 624 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 NDE1Q9NXR1 346 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 CALML5Q9NZT1 146 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 EGFL7Q9UHF1 273 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 PRPF19Q9UMS4 504 aaKnown RBP9.02□□□□□ -0.97
CLN8-202ENST00000517514 ZNF443Q9Y2A4 671 aaPredicted RBP9.02□□□□□ -0.97
CLN8-202ENST00000517514 B3GNT3Q9Y2A9 372 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 WIF1Q9Y5W5 379 aa9.02□□□□□ -0.97
CLN8-202ENST00000517514 C5orf58C9J3I9 102 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 M0QX08 132 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 CXCR6O00574 342 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 ACOT8O14734 319 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 GNB5O14775 395 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 SNPHO15079 494 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 ATXN7O15265 892 aaPredicted RBP9.01□□□□□ -0.97
CLN8-202ENST00000517514 GYG2O15488 501 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 HS6ST1O60243 411 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 DNAJC8O75937 253 aaPredicted RBP9.01□□□□□ -0.97
CLN8-202ENST00000517514 ATP5HO75947 161 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 OPN1SWP03999 348 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 P04436 131 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 DBIP07108 87 aaKnown RBP9.01□□□□□ -0.97
CLN8-202ENST00000517514 THBS1P07996 1170 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 PABPC4LP0CB38 370 aaKnown RBP9.01□□□□□ -0.97
CLN8-202ENST00000517514 NID1P14543 1247 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 TCN1P20061 433 aaPredicted RBP9.01□□□□□ -0.97
CLN8-202ENST00000517514 ATP6V1B2P21281 511 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 MEOX1P50221 254 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 KCNJ10P78508 379 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 FOXK1P85037 733 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 ZNF117Q03924 483 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 SKP2Q13309 424 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 DNAL1Q4LDG9 190 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 PRR30Q53SZ7 412 aaPredicted RBP9.01□□□□□ -0.97
CLN8-202ENST00000517514 RPUSD3Q6P087 351 aaKnown RBP9.01□□□□□ -0.97
CLN8-202ENST00000517514 DHRS4L2Q6PKH6 230 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 CCDC121Q6ZUS5 278 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 LACC1Q8IV20 430 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 FAM86B1Q8N7N1 296 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 OR2M3Q8NG83 312 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 OR4D11Q8NGI4 311 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 OR10Q1Q8NGQ4 319 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 WDR60Q8WVS4 1066 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 TM9SF4Q92544 642 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 MED12Q93074 2177 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 PNPLA2Q96AD5 504 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 C5orf34Q96MH7 638 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 GNRHR2Q96P88 292 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 NPAS1Q99742 590 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 FAM173AQ9BQD7 235 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 DOHHQ9BU89 302 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 UBQLN3Q9H347 655 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 DNAJB12Q9NXW2 375 aaKnown RBP9.01□□□□□ -0.97
CLN8-202ENST00000517514 KLRF1Q9NZS2 232 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 FBXL2Q9UKC9 423 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 ICAM5Q9UMF0 924 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 ANGPT4Q9Y264 503 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 KLF13Q9Y2Y9 288 aaPredicted RBP9.01□□□□□ -0.97
CLN8-202ENST00000517514 SHANK1Q9Y566 2161 aa9.01□□□□□ -0.97
CLN8-202ENST00000517514 ZNF407Q9C0G0 2248 aa9□□□□□ -0.97
CLN8-202ENST00000517514 CDHR4A6H8M9 788 aa9□□□□□ -0.97
CLN8-202ENST00000517514 SCDO00767 359 aa9□□□□□ -0.97
CLN8-202ENST00000517514 ARPC2O15144 300 aa9□□□□□ -0.97
CLN8-202ENST00000517514 FRS3O43559 492 aa9□□□□□ -0.97
CLN8-202ENST00000517514 TPST2O60704 377 aa9□□□□□ -0.97
CLN8-202ENST00000517514 SNX4O95219 450 aa9□□□□□ -0.97
CLN8-202ENST00000517514 CELA3AP09093 270 aa9□□□□□ -0.97
CLN8-202ENST00000517514 PRG2P13727 222 aa9□□□□□ -0.97
CLN8-202ENST00000517514 ME2P23368 584 aa9□□□□□ -0.97
CLN8-202ENST00000517514 MST1P26927 711 aa9□□□□□ -0.97
CLN8-202ENST00000517514 KCNJ5P48544 419 aa9□□□□□ -0.97
CLN8-202ENST00000517514 ZNF136P52737 540 aa9□□□□□ -0.97
CLN8-202ENST00000517514 HPCAP84074 193 aa9□□□□□ -0.97
CLN8-202ENST00000517514 GNA13Q14344 377 aa9□□□□□ -0.97
CLN8-202ENST00000517514 TOMM34Q15785 309 aaPredicted RBP9□□□□□ -0.97
CLN8-202ENST00000517514 NPTX1Q15818 432 aa9□□□□□ -0.97
CLN8-202ENST00000517514 HYAL4Q2M3T9 481 aa9□□□□□ -0.97
CLN8-202ENST00000517514 SPATS1Q496A3 300 aa9□□□□□ -0.97
CLN8-202ENST00000517514 TBCELQ5QJ74 424 aa9□□□□□ -0.97
CLN8-202ENST00000517514 MRPL2Q5T653 305 aaKnown RBP9□□□□□ -0.97
CLN8-202ENST00000517514 RNF220Q5VTB9 566 aa9□□□□□ -0.97
CLN8-202ENST00000517514 ZNF324BQ6AW86 544 aaPredicted RBP9□□□□□ -0.97
CLN8-202ENST00000517514 TIGD3Q6B0B8 471 aa9□□□□□ -0.97
CLN8-202ENST00000517514 GLYATQ6IB77 296 aa9□□□□□ -0.97
CLN8-202ENST00000517514 TSEN54Q7Z6J9 526 aaKnown RBP9□□□□□ -0.97
CLN8-202ENST00000517514 PATL1Q86TB9 770 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms