RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TMIGD3P0DMS9 266 aaPredicted RBP10.37□□□□□ -0.75
VCAN-212ENST00000515397 PEPDP12955 493 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 IGFBP2P18065 325 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 IL11P20809 199 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 CHMP24386 653 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 CTSSP25774 331 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 CDKN2CP42773 168 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 HCFC1P51610 2035 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 SLC18A1P54219 525 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 GPR68Q15743 365 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 TOMM34Q15785 309 aaPredicted RBP10.37□□□□□ -0.75
VCAN-212ENST00000515397 SLC25A35Q3KQZ1 300 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 PPP4R4Q6NUP7 873 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 CHMP1BQ7LBR1 199 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 SPATA19Q7Z5L4 167 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 ADGRE4PQ86SQ3 457 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 LUZP2Q86TE4 346 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 GRAMD2AQ8IUY3 354 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 DMRTC2Q8IXT2 367 aaPredicted RBP10.37□□□□□ -0.75
VCAN-212ENST00000515397 NATD1Q8N6N6 113 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 ACBD4Q8NC06 268 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 MBD3L2Q8NHZ7 208 aaPredicted RBP10.37□□□□□ -0.75
VCAN-212ENST00000515397 SFXN5Q8TD22 340 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 XAGE5Q8WWM1 108 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 TESCQ96BS2 214 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 ZG16BQ96DA0 208 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 SLC35G5Q96KT7 338 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 ATP6V1G3Q96LB4 118 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 STACQ99469 402 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 SDF2Q99470 211 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 PINK1Q9BXM7 581 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 OR51I1Q9H343 314 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 NEUROD4Q9HD90 331 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 MED17Q9NVC6 651 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 KCNE5Q9UJ90 142 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 MKLN1Q9UL63 735 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 ARHGAP21Q5T5U3 1957 aa10.37□□□□□ -0.75
VCAN-212ENST00000515397 PDZD2O15018 2839 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 DOCK7Q96N67 2140 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 IGLV3-32A0A0A0MS00 114 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 TRPC5OSA6NMA1 111 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 FAM47E-STBD1D6RA91 191 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 E9PBE3 544 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 GTPBP1O00178 669 aaKnown RBP10.36□□□□□ -0.75
VCAN-212ENST00000515397 SYT5O00445 386 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 DVL2O14641 736 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 TNFRSF21O75509 655 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 CYP7B1O75881 506 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 UQCRC2P22695 453 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 CHI3L1P36222 383 aaPredicted RBP10.36□□□□□ -0.75
VCAN-212ENST00000515397 CLNS1AP54105 237 aaKnown RBP10.36□□□□□ -0.75
VCAN-212ENST00000515397 SIRPAP78324 504 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 ZNF117Q03924 483 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 MYBPHQ13203 477 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 SF3B4Q15427 424 aaKnown RBP eCLIP10.36□□□□□ -0.75
VCAN-212ENST00000515397 KLHL26Q53HC5 615 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 PDZK1Q5T2W1 519 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 ANXA8L1Q5VT79 327 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 OGFOD2Q6N063 350 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 ZNF621Q6ZSS3 439 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 P4HA3Q7Z4N8 544 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 ZZZ3Q8IYH5 903 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 MEIOBQ8N635 442 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 ATP6V1C2Q8NEY4 427 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 VPS37AQ8NEZ2 397 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 OR9I1Q8NGQ6 314 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 B4GALNT2Q8NHY0 566 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 LINC01560Q8TB33 94 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 POC1BQ8TC44 478 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 PNPT1Q8TCS8 783 aaKnown RBP10.36□□□□□ -0.75
VCAN-212ENST00000515397 WNT2BQ93097 391 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 THOC1Q96FV9 657 aaKnown RBP10.36□□□□□ -0.75
VCAN-212ENST00000515397 LURAP1Q96LR2 239 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 RNF145Q96MT1 663 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 TREX2Q9BQ50 279 aaPredicted RBP10.36□□□□□ -0.75
VCAN-212ENST00000515397 PIGQQ9BRB3 760 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 SLC6A13Q9NSD5 602 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 CLCF1Q9UBD9 225 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 ZNF629Q9UEG4 869 aaPredicted RBP10.36□□□□□ -0.75
VCAN-212ENST00000515397 ITGB1BP2Q9UKP3 347 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 CLEC4AQ9UMR7 237 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 MED12LQ86YW9 2145 aa10.36□□□□□ -0.75
VCAN-212ENST00000515397 CSMD2Q7Z408 3487 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 PRAMEF27A3QJZ7 478 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 CCDC154A6NI56 674 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 SLC22A20A6NK97 555 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 EIF1AYO14602 144 aaKnown RBP10.35□□□□□ -0.75
VCAN-212ENST00000515397 EFNA2O43921 213 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 BCAS1O75363 584 aaPredicted RBP10.35□□□□□ -0.75
VCAN-212ENST00000515397 SLC22A3O75751 556 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 SASH3O75995 380 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 RCBTB2O95199 551 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 NUDT14O95848 222 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 NGFRP08138 427 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 CD1EP15812 388 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 SHC1P29353 583 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 SLC6A8P48029 635 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 ZNF41P51814 821 aaPredicted RBP10.35□□□□□ -0.75
VCAN-212ENST00000515397 ATP12AP54707 1039 aa10.35□□□□□ -0.75
VCAN-212ENST00000515397 MAPK14Q16539 360 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms