RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 MARCH3Q86UD3 253 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 VRK2Q86Y07 508 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 RBMXL3Q8N7X1 1067 aaKnown RBP19.19■□□□□ 0.66
LSM6-207ENST00000515311 ZNF614Q8N883 585 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 WBP1Q96G27 269 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 RNF145Q96MT1 663 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 FAM173AQ9BQD7 235 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 DOHHQ9BU89 302 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 GALNT9Q9HCQ5 603 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.19■□□□□ 0.66
LSM6-207ENST00000515311 SLC7A8Q9UHI5 535 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 B3GNT3Q9Y2A9 372 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 SLC35A3Q9Y2D2 325 aa19.19■□□□□ 0.66
LSM6-207ENST00000515311 ANGPTL1O95841 491 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 KCNJ2P63252 427 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 EEF1A1P68104 462 aaKnown RBP19.18■□□□□ 0.66
LSM6-207ENST00000515311 KCNJ10P78508 379 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 DMTNQ08495 405 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 C17orf67Q0P5P2 114 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 ZNF169Q14929 603 aaPredicted RBP19.18■□□□□ 0.66
LSM6-207ENST00000515311 CD226Q15762 336 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 EIPR1Q53HC9 387 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 LCN8Q6JVE9 175 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 ZNF836Q6ZNA1 936 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 PACS2Q86VP3 889 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 EXD3Q8N9H8 876 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 FAM71CQ8NEG0 241 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 SLC26A7Q8TE54 656 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 FAM162AQ96A26 154 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 TMEM41AQ96HV5 264 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 PINK1Q9BXM7 581 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 HES7Q9BYE0 225 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 RTN4RQ9BZR6 473 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 ARMC7Q9H6L4 198 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 KLHL1Q9NR64 748 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 DEPPQ9NTK1 212 aa19.18■□□□□ 0.66
LSM6-207ENST00000515311 NBEAQ8NFP9 2946 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 IGLV3-32A0A0A0MS00 114 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 CDHR4A6H8M9 788 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 KLRC4-KLRK1H3BQV0 150 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 ACOT8O14734 319 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 PEX1O43933 1283 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 TRIM3O75382 744 aaPredicted RBP19.17■□□□□ 0.66
LSM6-207ENST00000515311 UBL4AP11441 157 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 MS4A2Q01362 244 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 CYBRD1Q53TN4 286 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 MTX3Q5HYI7 312 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 MRPL2Q5T653 305 aaKnown RBP19.17■□□□□ 0.66
LSM6-207ENST00000515311 GALNTL5Q7Z4T8 443 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 DHFR2Q86XF0 187 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 GRAMD2AQ8IUY3 354 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 SULF2Q8IWU5 870 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 EID3Q8N140 333 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 OR2M7Q8NG81 312 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 PHOSPHO1Q8TCT1 267 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 SLC35B4Q969S0 331 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 NSMCE2Q96MF7 247 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 ZNF71Q9NQZ8 489 aaPredicted RBP19.17■□□□□ 0.66
LSM6-207ENST00000515311 ADPRHL2Q9NX46 363 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 POMPQ9Y244 141 aa19.17■□□□□ 0.66
LSM6-207ENST00000515311 NINQ8N4C6 2090 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 A0A0G2JMM0 328 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 A0A1W2PPB8 328 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 A0A1W2PRS3 328 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 ERICH4A6NGS2 130 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 KIR3DP1A8MWS1 328 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 G3V3Y1 287 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 SYT5O00445 386 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 ZNF264O43296 627 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 STAMBPO95630 424 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 SERPINA1P01009 418 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 CSTAP01040 98 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 OPN1SWP03999 348 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 C8BP07358 591 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 CD247P20963 164 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 ELAVL4P26378 380 aaKnown RBP19.16■□□□□ 0.66
LSM6-207ENST00000515311 KCNJ5P48544 419 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 DNASE1L1P49184 302 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 GATSQ8NAP1 163 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 DUSP19Q8WTR2 217 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 LZICQ8WZA0 190 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 UTP4Q969X6 686 aaKnown RBP19.16■□□□□ 0.66
LSM6-207ENST00000515311 ZNF597Q96LX8 424 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 RSPO3Q9BXY4 272 aaPredicted RBP19.16■□□□□ 0.66
LSM6-207ENST00000515311 EVA1AQ9H8M9 152 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 EXOSC3Q9NQT5 275 aaKnown RBP19.16■□□□□ 0.66
LSM6-207ENST00000515311 DCAF13Q9NV06 445 aaKnown RBP19.16■□□□□ 0.66
LSM6-207ENST00000515311 PPP4R1LQ9P1A2 415 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 RPS6KA6Q9UK32 745 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 BAG5Q9UL15 447 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 BOKQ9UMX3 212 aaPredicted RBP19.16■□□□□ 0.66
LSM6-207ENST00000515311 CHST2Q9Y4C5 530 aa19.16■□□□□ 0.66
LSM6-207ENST00000515311 TLN1Q9Y490 2541 aaKnown RBP19.15■□□□□ 0.66
LSM6-207ENST00000515311 CLDN24A6NM45 220 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 GTPBP1O00178 669 aaKnown RBP19.15■□□□□ 0.66
LSM6-207ENST00000515311 SNPHO15079 494 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 EIF4E2O60573 245 aaKnown RBP19.15■□□□□ 0.66
LSM6-207ENST00000515311 ATP6V1B2P21281 511 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 MSX1P28360 303 aa19.15■□□□□ 0.66
LSM6-207ENST00000515311 MASP1P48740 699 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms