RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 RAB11FIP2Q7L804 512 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 TMPRSS9Q7Z410 1059 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF615Q8N8J6 731 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 THEM6Q8WUY1 208 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 BCL7CQ8WUZ0 217 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 S100A16Q96FQ6 103 aaKnown RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF350Q9GZX5 532 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 NPIPA1Q9UND3 350 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 LCMT2O60294 686 aaKnown RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 DRD2P14416 443 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 AOAHP28039 575 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 CTBP2P56545 445 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 OR12D2P58182 307 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 PLGLB1Q02325 96 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 TEX26Q8N6G2 289 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF454Q8N9F8 522 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 UBE2FQ969M7 185 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 METTL17Q9H7H0 456 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 NMNAT1Q9HAN9 279 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-213ENST00000514442 DMRT3Q9NQL9 472 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 SDHAF3Q9NRP4 125 aa12.37□□□□□ -0.43
TCOF1-213ENST00000514442 C11orf98E9PRG8 122 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 HMGA1P17096 107 aaKnown RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 MAOBP27338 520 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 PON3Q15166 354 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 OTUD1Q5VV17 481 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 SVBPQ8N300 66 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 RASGEF1AQ8N9B8 481 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 GNPDA2Q8TDQ7 276 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 TOE1Q96GM8 510 aaKnown RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 TEX37Q96LM6 180 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 TXNL4BQ9NX01 149 aaKnown RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 GNG8Q9UK08 70 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 PRELID3BQ9Y3B1 194 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 MT-ND5P03915 603 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 SBK3P0C264 359 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 JMJD7P0C870 316 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 SLC6A9P48067 706 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 SELENOWP63302 87 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 EXOSC2Q13868 293 aaKnown RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 DEFB133Q30KQ1 61 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 CD276Q5ZPR3 534 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 TMEM185AQ8NFB2 350 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 OR52E1Q8NGJ3 308 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 OR51G2Q8NGK0 314 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 GIMAP1Q8WWP7 306 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 LINC01599Q8WXQ3 324 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 CNOT9Q92600 299 aaKnown RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 SLAMF7Q9NQ25 335 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 MRPL15Q9P015 296 aaKnown RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF639Q9UID6 485 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 PCDHGA6Q9Y5G7 932 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 FXYD1O00168 92 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 SHOXO15266 292 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 AHSA1O95433 338 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 HRGP04196 525 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 CASRP41180 1078 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 OCLNQ16625 522 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 HCAR2Q8TDS4 363 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF480Q8WV37 535 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 ECHDC3Q96DC8 303 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 CLMPQ9H6B4 373 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 RDH14Q9HBH5 336 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 FTSJ1Q9UET6 329 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 COPS3Q9UNS2 423 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 TOR1AO14656 332 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 TPOP07202 933 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 HOXC13P31276 330 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 HNRNPKP61978 463 aaKnown RBP eCLIP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 EIF5AL1Q6IS14 154 aaKnown RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 GALNTL5Q7Z4T8 443 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 CEACAM19Q7Z692 300 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 KLBQ86Z14 1044 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 OR2T11Q8NH01 316 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 SUN3Q8TAQ9 357 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 TRMT10AQ8TBZ6 339 aaKnown RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 WBP2Q969T9 261 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 ARRDC3Q96B67 414 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 EGLN2Q96KS0 407 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 TREX2Q9BQ50 279 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 PELI2Q9HAT8 420 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 C19orf25Q9UFG5 118 aaPredicted RBP12.36□□□□□ -0.43
TCOF1-213ENST00000514442 CLEC4EQ9ULY5 219 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 HS3ST2Q9Y278 367 aa12.36□□□□□ -0.43
TCOF1-213ENST00000514442 WRBO00258 174 aa12.35□□□□□ -0.43
TCOF1-213ENST00000514442 SOX1O00570 391 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-213ENST00000514442 CDK2AP1O14519 115 aa12.35□□□□□ -0.43
TCOF1-213ENST00000514442 NARSO43776 548 aaKnown RBP12.35□□□□□ -0.43
TCOF1-213ENST00000514442 ZNF888P0CJ79 500 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-213ENST00000514442 PTPN6P29350 595 aa12.35□□□□□ -0.43
TCOF1-213ENST00000514442 CPPED1Q9BRF8 314 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-213ENST00000514442 FBRSQ9HAH7 460 aa12.35□□□□□ -0.43
TCOF1-213ENST00000514442 GRHPRQ9UBQ7 328 aa12.35□□□□□ -0.43
TCOF1-213ENST00000514442 PRODH2Q9UF12 536 aa12.35□□□□□ -0.43
TCOF1-213ENST00000514442 PADI2Q9Y2J8 665 aa12.35□□□□□ -0.43
TCOF1-213ENST00000514442 LOC105371267A0A1B0GV96 52 aa12.35□□□□□ -0.43
TCOF1-213ENST00000514442 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
TCOF1-213ENST00000514442 F5H0A9 414 aaPredicted RBP12.35□□□□□ -0.43
TCOF1-213ENST00000514442 CDC40O60508 579 aaKnown RBP eCLIP12.35□□□□□ -0.439e-7■■■□□ 18.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms