RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 OR14L1PQ8NHC6 308 aa8.78□□□□□ -1
RNF4-221ENST00000513643 DTNBP1Q96EV8 351 aa8.78□□□□□ -1
RNF4-221ENST00000513643 MAGEB18Q96M61 343 aa8.78□□□□□ -1
RNF4-221ENST00000513643 OR52E6Q96RD3 313 aa8.78□□□□□ -1
RNF4-221ENST00000513643 TUBA1CQ9BQE3 449 aa8.78□□□□□ -1
RNF4-221ENST00000513643 EBF4Q9BQW3 602 aa8.78□□□□□ -1
RNF4-221ENST00000513643 INPP5KQ9BT40 448 aa8.78□□□□□ -1
RNF4-221ENST00000513643 TBL1XR1Q9BZK7 514 aa8.78□□□□□ -1
RNF4-221ENST00000513643 SLC6A13Q9NSD5 602 aa8.78□□□□□ -1
RNF4-221ENST00000513643 INTS9Q9NV88 658 aaKnown RBP8.78□□□□□ -1
RNF4-221ENST00000513643 COQ3Q9NZJ6 369 aa8.78□□□□□ -1
RNF4-221ENST00000513643 JKAMPQ9P055 326 aa8.78□□□□□ -1
RNF4-221ENST00000513643 CLCF1Q9UBD9 225 aa8.78□□□□□ -1
RNF4-221ENST00000513643 ICAM5Q9UMF0 924 aa8.78□□□□□ -1
RNF4-221ENST00000513643 PCDHGB4Q9UN71 923 aa8.78□□□□□ -1
RNF4-221ENST00000513643 ZNF337Q9Y3M9 751 aa8.78□□□□□ -1
RNF4-221ENST00000513643 A0A087WZY1 265 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 CCDC154A6NI56 674 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 HSPB2A8KAH6 182 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 C9JVG2 144 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 HMGN4O00479 90 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 HNRNPRO43390 633 aaKnown RBP8.77□□□□□ -1.01
RNF4-221ENST00000513643 OIP5O43482 229 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 NDUFB5O43674 189 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 EFNA2O43921 213 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 AGR2O95994 175 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 IL18BPO95998 194 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 LINGO3P0C6S8 592 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 PRF1P14222 555 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 ZNF17P17021 662 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 HK1P19367 917 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 ZNF136P52737 540 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 SUCLG1P53597 346 aaKnown RBP8.77□□□□□ -1.01
RNF4-221ENST00000513643 NME5P56597 212 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 IRX1P78414 480 aaPredicted RBP8.77□□□□□ -1.01
RNF4-221ENST00000513643 TXNL4AP83876 142 aaKnown RBP8.77□□□□□ -1.01
RNF4-221ENST00000513643 HSPB2Q16082 182 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 PLPPR5Q32ZL2 321 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 SPDYE7PQ495Y7 208 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 SLC25A53Q5H9E4 307 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 AAGABQ6PD74 315 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 CBLN3Q6UW01 205 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 ENPP6Q6UWR7 440 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 SZRD1Q7Z422 152 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 GTPBP8Q8N3Z3 284 aaPredicted RBP8.77□□□□□ -1.01
RNF4-221ENST00000513643 FAM71CQ8NEG0 241 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 TNIP2Q8NFZ5 429 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 OR9I1Q8NGQ6 314 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 POC1BQ8TC44 478 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 ZFP90Q8TF47 636 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 CA5BP1Q8WTZ4 195 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 GTF2H4Q92759 462 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 WNT2BQ93097 391 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 ZG16BQ96DA0 208 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 ARSGQ96EG1 525 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 ADGRG7Q96K78 797 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 NPAS1Q99742 590 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 UCK2Q9BZX2 261 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 OR51I1Q9H343 314 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 ZNF385DQ9H6B1 395 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 PTGES2Q9H7Z7 377 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 TCF7L2Q9NQB0 619 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 POLE3Q9NRF9 147 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 MED17Q9NVC6 651 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 ZNF629Q9UEG4 869 aaPredicted RBP8.77□□□□□ -1.01
RNF4-221ENST00000513643 DTNAQ9Y4J8 743 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 CREBBPQ92793 2442 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 OTOGQ6ZRI0 2925 aa8.77□□□□□ -1.01
RNF4-221ENST00000513643 KIAA1549Q9HCM3 1950 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 CENPVL1A0A0U1RR11 272 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 FAM234BA2RU67 622 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 SYT5O00445 386 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 SCDO00767 359 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 ADAMDEC1O15204 470 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 KIAA0513O60268 411 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 EIF4E2O60573 245 aaKnown RBP8.76□□□□□ -1.01
RNF4-221ENST00000513643 EDF1O60869 148 aaKnown RBP8.76□□□□□ -1.01
RNF4-221ENST00000513643 DIAPH2O60879 1101 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 TNFRSF21O75509 655 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 STX11O75558 287 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 UGT2B17O75795 530 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 RCBTB2O95199 551 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 CPSF4O95639 269 aaKnown RBP8.76□□□□□ -1.01
RNF4-221ENST00000513643 OR12D1P0DN82 309 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 PEPDP12955 493 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 CD1EP15812 388 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 RFX3P48380 749 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 ATP4BP51164 291 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 POLR2JP52435 117 aaKnown RBP8.76□□□□□ -1.01
RNF4-221ENST00000513643 AQP5P55064 265 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 PLAURQ03405 335 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 ZNF117Q03924 483 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 STX5Q13190 355 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 RCAN2Q14206 197 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 TOMM20Q15388 145 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 GUSBP1Q15486 140 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 MAPK14Q16539 360 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 CTU2Q2VPK5 515 aaKnown RBP8.76□□□□□ -1.01
RNF4-221ENST00000513643 SLC25A35Q3KQZ1 300 aa8.76□□□□□ -1.01
RNF4-221ENST00000513643 NXNQ6DKJ4 435 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms