RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ERVPABLB-1P60509 514 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 HNRNPKP61978 463 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 MRPS22P82650 360 aaKnown RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 KRT33BQ14525 404 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 SFT2D3Q587I9 215 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 OGFRL1Q5TC84 451 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 LAYNQ6UX15 382 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 MOB3CQ70IA8 216 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 TMEM126BQ8IUX1 230 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CCDC36Q8IYA8 594 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 KIAA2013Q8IYS2 634 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 POMGNT2Q8NAT1 580 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 BPIFCQ8NFQ6 507 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CNOT9Q92600 299 aaKnown RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 ROPN1LQ96C74 230 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 ERLEC1Q96DZ1 483 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 ACTR8Q9H981 624 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 SDR39U1Q9NRG7 319 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-206ENST00000507875 GIMAP4Q9NUV9 329 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 TMEM181Q9P2C4 612 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 ZNF225Q9UK10 706 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 BTRCQ9Y297 605 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CACNG2Q9Y698 323 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 CACNA1IQ9P0X4 2223 aa6.61□□□□□ -1.35
CLCN3-206ENST00000507875 GXYLT2A0PJZ3 443 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 UBE2QL1A1L167 161 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 MAGEA13PA6NCF6 341 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 PRORSD1PA6NEY8 169 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 SNTNA6NMZ2 147 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 MANBAO00462 879 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 PAGE4O60829 102 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 SLC16A8O95907 504 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 CAPN1P07384 714 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 CDKN1BP46527 198 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 C21orf59P57076 290 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 LOXL3P58215 753 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 ERVK-8P63133 956 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 IRF8Q02556 426 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 EMX2Q04743 252 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 NAE1Q13564 534 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 TSTA3Q13630 321 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-206ENST00000507875 KIR2DS3Q14952 304 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 MEP1BQ16820 701 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 SAMD4BQ5PRF9 694 aaKnown RBP6.6□□□□□ -1.35
CLCN3-206ENST00000507875 C18orf63Q68DL7 685 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 TMEM81Q6P7N7 255 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 MSANTD1Q6ZTZ1 278 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 RFPL4BQ6ZWI9 263 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 LAS2Q8IYD9 372 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 CMTM4Q8IZR5 234 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 SLC22A18ASQ8N1D0 253 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 ENKURQ8TC29 256 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 RFKQ969G6 155 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 ESAMQ96AP7 390 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 TMCO6Q96DC7 493 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 CXorf40BQ96DE9 158 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 MMABQ96EY8 250 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-206ENST00000507875 C7orf34Q96L11 122 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 VCXQ9H320 206 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 FAM212BQ9NTI7 297 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-206ENST00000507875 C20orf141Q9NUB4 165 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 TMEM184CQ9NVA4 438 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 C2orf42Q9NWW7 574 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 CD300AQ9UGN4 299 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 DLGAP4Q9Y2H0 992 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 KLK4Q9Y5K2 254 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 SPACA6W5XKT8 324 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 MYO15AQ9UKN7 3530 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 DPPA5A6NC42 116 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 PDZK1P1A8MUH7 402 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 HRKO00198 91 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 SSX5O60225 188 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 TGM6O95932 706 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 GSTT2P0CG29 244 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 GSTT2BP0CG30 244 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 COX7A2P14406 83 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 UQCRBP14927 111 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 ARHGDIAP52565 204 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 AQP4P55087 323 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 TBPL1P62380 186 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 HGFACQ04756 655 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 NTRK2Q16620 822 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 CD300EQ496F6 205 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-206ENST00000507875 COQ5Q5HYK3 327 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 LYSMD4Q5XG99 296 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 PMS2CLQ68D20 193 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 MED27Q6P2C8 311 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 C17orf64Q86WR6 236 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 NRROSQ86YC3 692 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 ABHD11Q8NFV4 315 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 OR4K1Q8NGD4 311 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 OR5AR1Q8NGP9 310 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 SNX19Q92543 992 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 TFAP2CQ92754 450 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 ZBTB8AQ96BR9 441 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 PDXPQ96GD0 296 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 LOXL4Q96JB6 756 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 HOPXQ9BPY8 73 aaPredicted RBP6.6□□□□□ -1.35
CLCN3-206ENST00000507875 AIF1LQ9BQI0 150 aa6.6□□□□□ -1.35
CLCN3-206ENST00000507875 ERVK-11Q9UQG0 969 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms