RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CTIFO43310 598 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 PEX11AO75192 247 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 AK1P00568 194 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 PLGP00747 810 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 IGKV1D-16P01601 117 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 HMGN2P05204 90 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 KLK2P20151 261 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 FPR1P21462 350 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 EIF1AXP47813 144 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 KCNJ5P48544 419 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 CCT3P49368 545 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 CTBP2P56545 445 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 CLDN20P56880 219 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 C21orf58P58505 322 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 LASP1Q14847 261 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 C6orf136Q5SQH8 315 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 SHEQ5VZ18 495 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 VWA1Q6PCB0 445 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 FIGNL1Q6PIW4 674 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 APOOLQ6UXV4 268 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 BTLAQ7Z6A9 289 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 CROCCP2Q86T23 111 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 STK32CQ86UX6 486 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 CLHC1Q8NHS4 586 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 B4GALNT2Q8NHY0 566 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 PPP1R14CQ8TAE6 165 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 OIT3Q8WWZ8 545 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 PIGTQ969N2 578 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 COQ8BQ96D53 544 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 CHMP6Q96FZ7 201 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 PIP5K1AQ99755 562 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 MED18Q9BUE0 208 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 OR10A4Q9H209 315 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 LIME1Q9H400 295 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 MED17Q9NVC6 651 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 VDAC3Q9Y277 283 aa12.97□□□□□ -0.33
HMGCS1-203ENST00000507004 ARHGEF9O43307 516 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 SLU7O95391 586 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 CGAP01215 116 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 BPGMP07738 259 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 CRYGSP22914 178 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 UGT2B10P36537 528 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 VSNL1P62760 191 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 SIRPAP78324 504 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 FAM27E3Q08E93 113 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 GUSBP1Q15486 140 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 PLPPR5Q32ZL2 321 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 KRTAP21-3Q3LHN1 58 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 SPDYE7PQ495Y7 208 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 IL23RQ5VWK5 629 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 GGNQ86UU5 652 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 NUDCD3Q8IVD9 361 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 LRRC34Q8IZ02 419 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 OR2W6PQ8NHA6 318 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 OR2V1Q8NHB1 315 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 AENQ8WTP8 325 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 TUBGCP3Q96CW5 907 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 REXO5Q96IC2 774 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 GP6Q9HCN6 339 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 SSU72Q9NP77 194 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 PLSCR4Q9NRQ2 329 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 SIRT3Q9NTG7 399 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 ASIC5Q9NY37 505 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 NOP53Q9NZM5 478 aaKnown RBP12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 SLC17A7Q9P2U7 560 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 SNX8Q9Y5X2 465 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 ACTL7BQ9Y614 415 aa12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 GPC6Q9Y625 555 aaPredicted RBP12.96□□□□□ -0.33
HMGCS1-203ENST00000507004 C17orf51A8MQB3 221 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 TMEM233B4DJY2 109 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 TMCC2O75069 709 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 SS18L1O75177 396 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 SPAG7O75391 227 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 AGR2O95994 175 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 LAMP1P11279 417 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 P2RX1P51575 399 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 ATP12AP54707 1039 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 EMX2Q04743 252 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 ZNF474Q6S9Z5 364 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 C20orf204Q6ZNR8 217 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 BEND4Q6ZU67 534 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 LRRC75A-AS1Q8N1F1 130 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 MREGQ8N565 214 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 VPS37AQ8NEZ2 397 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 TOR1AIP2Q8NFQ8 470 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 OR5M1Q8NGP8 315 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 OR10D3Q8NH80 312 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 CPNE4Q96A23 557 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 C16orf58Q96GQ5 468 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 ADGRG7Q96K78 797 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 USB1Q9BQ65 265 aaKnown RBP12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 TACO1Q9BSH4 297 aaKnown RBP12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 DUSP26Q9BV47 211 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 MECRQ9BV79 373 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 OPN3Q9H1Y3 402 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 PCDHGB4Q9UN71 923 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 MTORP42345 2549 aa12.95□□□□□ -0.34
HMGCS1-203ENST00000507004 TM9SF1O15321 606 aa12.94□□□□□ -0.34
HMGCS1-203ENST00000507004 BIRC5O15392 142 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms