RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 VEGFCP49767 419 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 NOGQ13253 232 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 ZNF169Q14929 603 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 ETFDHQ16134 617 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 SFRP5Q5T4F7 317 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 HENMT1Q5T8I9 393 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 BAIAP2L2Q6UXY1 529 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 ZNF620Q6ZNG0 422 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 CXXC5Q7LFL8 322 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 EIF4E3Q8N5X7 224 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 TMEM99Q8N816 258 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 TEX19Q8NA77 164 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 COQ8AQ8NI60 647 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 SORCS1Q8WY21 1168 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 NR4A3Q92570 626 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 RIOK2Q9BVS4 552 aaKnown RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 AUNIPQ9H7T9 357 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 KLHL1Q9NR64 748 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 ACSS1Q9NUB1 689 aaPredicted RBP15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 ABRACLQ9P1F3 81 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 MGAT4CQ9UBM8 478 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 ATPIF1Q9UII2 106 aa15.95■□□□□ 0.14
SQSTM1-211ENST00000506690 PDCD5O14737 125 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 ITGA10O75578 1167 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 FCER2P06734 321 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 SNRPBP14678 240 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 CPN1P15169 458 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 PSMB1P20618 241 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 PAICSP22234 425 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 OR1D2P34982 312 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 SP3Q02447 781 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 ELAVL2Q12926 359 aaKnown RBP15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 CAMK1Q14012 370 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 HLXQ14774 488 aaPredicted RBP15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 MLC1Q15049 377 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 PIP5KL1Q5T9C9 394 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 SFRP4Q6FHJ7 346 aaPredicted RBP15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 ESPNLQ6ZVH7 1005 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 PRSS45Q7RTY3 260 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 GJD3Q8N144 294 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 SUN3Q8TAQ9 357 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 CA10Q9NS85 328 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 POM121CA8CG34 1229 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 HMGN1P05114 100 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 ATF1P18846 271 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 CCR9P51686 369 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 ZNF658BQ4V348 819 aaPredicted RBP15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 MTFR2Q6P444 385 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 SZRD1Q7Z422 152 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 GID4Q8IVV7 300 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 OR2T33Q8NG76 320 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 OR9A1PQ8NGU1 263 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 ZNF764Q96H86 408 aaPredicted RBP15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 TBX5Q99593 518 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 ANKRD19PQ9H560 264 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 HS3ST2Q9Y278 367 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 PRELID3BQ9Y3B1 194 aa15.94■□□□□ 0.14
SQSTM1-211ENST00000506690 A0A0B4J203 849 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 OR2M5A3KFT3 312 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 OR2A4O95047 310 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 POP4O95707 220 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 LDOC1O95751 146 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 ALPPL2P10696 532 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 XPAP23025 273 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 PBLDP30039 288 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 RAP2BP61225 183 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 SIM1P81133 766 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 ST3GAL3Q11203 375 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 HTR4Q13639 388 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 TMEM255AQ5JRV8 349 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 KHDRBS2Q5VWX1 349 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 ALKAL2Q6UX46 152 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 ADCK2Q7Z695 626 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 TMEM150AQ86TG1 271 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 FAM129CQ86XR2 697 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 FIBINQ8TAL6 211 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 TRMT2BQ96GJ1 504 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 PGLYRP3Q96LB9 341 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 OR2A7Q96R45 310 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 IFT27Q9BW83 186 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 ZCCHC4Q9H5U6 513 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 HRASLSQ9HDD0 168 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 IL20RAQ9UHF4 553 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 COPS3Q9UNS2 423 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 DAPL1A0PJW8 107 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 CPSF4LA6NMK7 179 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 DNASE2O00115 360 aaPredicted RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 SYT5O00445 386 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 SUSD5O60279 629 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 SELENOFO60613 162 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 AHRP35869 848 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 CBX5P45973 191 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 GPR4P46093 362 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 GATMP50440 423 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 POLR2LP62875 67 aaKnown RBP15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 SLC3A1Q07837 685 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 ELFN2Q5R3F8 820 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 ZNF697Q5TEC3 545 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 NIPAL3Q6P499 406 aa15.93■□□□□ 0.14
SQSTM1-211ENST00000506690 TMEM220Q6QAJ8 160 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms