RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 DHCR24Q15392 516 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 FCRLBQ6BAA4 426 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 MRM1Q6IN84 353 aaKnown RBP11.07□□□□□ -0.64
UBE3D-206ENST00000505226 SIAH3Q8IW03 269 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 LRRC17Q8N6Y2 441 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 SLC16A11Q8NCK7 471 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 PXYLP1Q8TE99 480 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 ELP4Q96EB1 424 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 DPH1Q9BZG8 443 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 OR51J1Q9H342 316 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 MED17Q9NVC6 651 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 UCKL1Q9NWZ5 548 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 KCNN3Q9UGI6 736 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 FBXL4Q9UKA2 621 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 REV3LO60673 3130 aa11.07□□□□□ -0.64
UBE3D-206ENST00000505226 TEX13CA0A0J9YWL9 993 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 HIDE1A8MVS5 230 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 TPOP07202 933 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 MRPL3P09001 348 aaKnown RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 MAKP20794 623 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 HIST1H1TP22492 207 aaPredicted RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 STOMP27105 288 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 RBMS1P29558 406 aaKnown RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 RGS8P57771 180 aaPredicted RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ZIC1Q15915 447 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ST3GAL2Q16842 350 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 FAM111BQ6SJ93 734 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 CEACAM19Q7Z692 300 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 TRMT10AQ8TBZ6 339 aaKnown RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 GANCQ8TET4 914 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 YIPF5Q969M3 257 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 SORCS2Q96PQ0 1159 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 PRSS27Q9BQR3 290 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 H2AFY2Q9P0M6 372 aaPredicted RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ING4Q9UNL4 249 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 A0A1W2PPK0 400 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 BTN3A3O00478 584 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 NARSO43776 548 aaKnown RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 PDGFAP04085 211 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ATP5A1P25705 553 aaKnown RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ACVR1BP36896 505 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 PRDX1Q06830 199 aaKnown RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 CAMK2DQ13557 499 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ABHD17CQ6PCB6 329 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 SHISA5Q8N114 240 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 OR10H4Q8NGA5 316 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 PFN4Q8NHR9 129 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ABHD4Q8TB40 342 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 SFXN5Q8TD22 340 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ING5Q8WYH8 240 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF681Q96N22 645 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ORAI3Q9BRQ5 295 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 KCNN2Q9H2S1 579 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 OR52D1Q9H346 318 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 EMC7Q9NPA0 242 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 PRKAG2Q9UGJ0 569 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 PHF11Q9UIL8 331 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 SLC13A4Q9UKG4 626 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 RPS10-NUDT3A0A1W2PQS6 291 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 G3V3Q6 166 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 MAGEB4O15481 346 aaPredicted RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 CFDP00746 253 aaPredicted RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 PRNPP04156 253 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 RHOP08100 348 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 F3P13726 295 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 NOS3P29474 1203 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ACSL1P33121 698 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 TALDO1P37837 337 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ZNF136P52737 540 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 BDH1Q02338 343 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 RGS1Q08116 209 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 RPA4Q13156 261 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 SLC48A1Q6P1K1 146 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 THSD4Q6ZMP0 1018 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 FRRS1Q6ZNA5 592 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 IDO2Q6ZQW0 420 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ERN2Q76MJ5 926 aaKnown RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 MEPCEQ7L2J0 689 aaKnown RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 RFLNBQ8N5W9 214 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 THAP4Q8WY91 577 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 INSM2Q96T92 566 aaPredicted RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 DPCDQ9BVM2 203 aaPredicted RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 FAIM2Q9BWQ8 316 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ANKRD19PQ9H560 264 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 SYNDIG1Q9H7V2 258 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 BEX1Q9HBH7 125 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.06□□□□□ -0.64
UBE3D-206ENST00000505226 SPEF1Q9Y4P9 236 aa11.06□□□□□ -0.64
UBE3D-206ENST00000505226 OTOL1A6NHN0 477 aaPredicted RBP11.05□□□□□ -0.64
UBE3D-206ENST00000505226 BHLHE40O14503 412 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 EMC8O43402 210 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 SC5DO75845 299 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 DHFRP00374 187 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 PCCBP05166 539 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 TEAD1P28347 426 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 OR12D2P58182 307 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 ZP1P60852 638 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 GALEQ14376 348 aa11.05□□□□□ -0.64
UBE3D-206ENST00000505226 FGFBP1Q14512 234 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms