RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 GNSP15586 552 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CEBPBP17676 345 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 FUT1P19526 365 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CELP19835 753 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 KELP23276 732 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CCR8P51685 355 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CLCNKAP51800 687 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 STXBP1P61764 594 aaKnown RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ALDH6A1Q02252 535 aaKnown RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CHRNEQ04844 493 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 UBE3AQ05086 875 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 FAPQ12884 760 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SMAD2Q15796 467 aaKnown RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 HLA-DQA1Q5Y7H0 255 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 OR4C11Q6IEV9 310 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 C1orf94Q6P1W5 598 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TMEM107Q6UX40 140 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 AMZ2Q86W34 360 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 NKAIN4Q8IVV8 208 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CADM2Q8N3J6 435 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 YIPF7Q8N8F6 280 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ZNF557Q8N988 423 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 OR4Q3Q8NH05 313 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SMAP2Q8WU79 429 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 UBE2E3Q969T4 207 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 GFM1Q96RP9 751 aaKnown RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 AIF1LQ9BQI0 150 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 DPEP2Q9H4A9 486 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 RNF121Q9H920 327 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 P2RX2Q9UBL9 471 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ZNF281Q9Y2X9 895 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ATG4BQ9Y4P1 393 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 OR1A2Q9Y585 309 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CSNK1G3Q9Y6M4 447 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MAU2Q9Y6X3 613 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 HEATR5BQ9P2D3 2071 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 A0A0G2JMP0 313 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 A0A1W2PR48 441 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 IGLON5A6NGN9 336 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MAN2B1O00754 1011 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SOCS6O14544 535 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 FCMRO60667 390 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PDE9AO76083 593 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 THY1P04216 161 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ACP2P11117 423 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ACP5P13686 325 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 EPCAMP16422 314 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PRKCAP17252 672 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MYL12AP19105 171 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TRIM23P36406 574 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SSR2P43308 183 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 GPR4P46093 362 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MTNR1AP48039 350 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SMSP52788 366 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 EPHA5P54756 1037 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ST8SIA6P61647 398 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CSNK1G2P78368 415 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ZNF155Q12901 538 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 EFR3AQ14156 821 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 LRRC32Q14392 662 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PDCD1Q15116 288 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SHHQ15465 462 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 LTB4RQ15722 352 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TATDN3Q17R31 274 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ENTPD8Q5MY95 495 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 DDI2Q5TDH0 399 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 FAM109BQ6ICB4 259 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SYCE2Q6PIF2 218 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 IL20RBQ6UXL0 311 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 QSOX2Q6ZRP7 698 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 NR2C2APQ86WQ0 139 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MARCH9Q86YJ5 346 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 Q8N402 240 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CLDN22Q8N7P3 220 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ZNF485Q8NCK3 441 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SUN3Q8TAQ9 357 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TMEM163Q8TC26 289 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 KAT2AQ92830 837 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 RGMAQ96B86 450 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 CNRIP1Q96F85 164 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 BBS4Q96RK4 519 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 JMJD8Q96S16 334 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ATF6BQ99941 703 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MTIF3Q9H2K0 278 aaKnown RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PPP1R3EQ9H7J1 279 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 MED20Q9H944 212 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ISG20L2Q9H9L3 353 aaKnown RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SLC35C2Q9NQQ7 365 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 TPSG1Q9NRR2 321 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 PCDHGA9Q9Y5G4 932 aaKnown RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 ALG5Q9Y673 324 aa6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SIRT4Q9Y6E7 314 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SCN3AQ9NY46 2000 aa6.12□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 A0A0A6YYD5 115 aa6.12□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 A0A0X1KG70 313 aa6.12□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 GSAPA4D1B5 854 aa6.12□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 LRIT2A6NDA9 550 aa6.12□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 GTPBP1O00178 669 aaKnown RBP6.12□□□□□ -1.43
NPHP3-AS1-202ENST00000504440 SLC30A4O14863 429 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms