RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 MICU2Q8IYU8 434 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 TMEM251Q8N6I4 163 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 ZFP62Q8NB50 900 aaPredicted RBP12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 FAM98AQ8NCA5 519 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 HIPK4Q8NE63 616 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 OR2T12Q8NG77 320 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 OR1J4Q8NGS1 313 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 OR52P1PQ8NH57 321 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 BBS10Q8TAM1 723 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 TMEM41AQ96HV5 264 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNF597Q96LX8 424 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 DEFB127Q9H1M4 99 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 DSN1Q9H410 356 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 SPAG4Q9NPE6 437 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 ASF1BQ9NVP2 202 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 TAS2R1Q9NYW7 299 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 CALML5Q9NZT1 146 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 PPP4R1LQ9P1A2 415 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 ABCD2Q9UBJ2 740 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 CARD8Q9Y2G2 431 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 TLN1Q9Y490 2541 aaKnown RBP12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 DSPPQ9NZW4 1301 aa12.1□□□□□ -0.47
PDLIM7-212ENST00000504380 PRORSD1PA6NEY8 169 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 AGAP5A6NIR3 686 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 NPIPA5E9PKD4 350 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 GTPBP1O00178 669 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 CYP7B1O75881 506 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 PDE9AO76083 593 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 GLSO94925 669 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 GUSBP08236 651 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 NCK1P16333 377 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 RPS4Y1P22090 263 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 MAGEA5P43359 124 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 EEFSECP57772 596 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 PLAURQ03405 335 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 RBBP4Q09028 425 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 GNA13Q14344 377 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 TIGD3Q6B0B8 471 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 CBLN3Q6UW01 205 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNF836Q6ZNA1 936 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 PEX5LQ8IYB4 626 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 CLIP4Q8N3C7 705 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNF527Q8NB42 609 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 OR2M3Q8NG83 312 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 WDR60Q8WVS4 1066 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 CNOT9Q92600 299 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 SLC7A6OSQ96CW6 309 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 REXO5Q96IC2 774 aaKnown RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 KCTD14Q9BQ13 255 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 BCL2L10Q9HD36 194 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 ZFP64Q9NPA5 681 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 SDHAF3Q9NRP4 125 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 RLIMQ9NVW2 624 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 ANAPC2Q9UJX6 822 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 BOKQ9UMX3 212 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 NPIPA1Q9UND3 350 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 ANGPT4Q9Y264 503 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 ZNF443Q9Y2A4 671 aaPredicted RBP12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 SPTA1P02549 2419 aa12.09□□□□□ -0.47
PDLIM7-212ENST00000504380 COL6A6A6NMZ7 2263 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 A0A1W2PQD3 144 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 ELOVL7A1L3X0 281 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 M0QX08 132 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 HCRTR2O43614 444 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 TPST1O60507 370 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 CDC40O60508 579 aaKnown RBP eCLIP12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 DBIP07108 87 aaKnown RBP12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 UBTFL6P0CB48 400 aaPredicted RBP12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 IL7RP16871 459 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 GDF1P27539 372 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 PCBP3P57721 371 aaKnown RBP12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 KCNJ10P78508 379 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 FOXK1P85037 733 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 ALDH6A1Q02252 535 aaKnown RBP12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 ZNF117Q03924 483 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 DMTNQ08495 405 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 C17orf67Q0P5P2 114 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 CEACAM7Q14002 265 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 FGFBP1Q14512 234 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 TOMM20Q15388 145 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 GLIPR1L2Q4G1C9 344 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 ZNF311Q5JNZ3 666 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 AP1ARQ63HQ0 302 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 FAM180AQ6UWF9 173 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 BNC2Q6ZN30 1099 aaPredicted RBP12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 COMTD1Q86VU5 262 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 PLCZ1Q86YW0 608 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 METTL25Q8N6Q8 603 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 SMYD1Q8NB12 490 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 OR4K17Q8NGC6 315 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 ZNF524Q96C55 264 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 CLPTM1LQ96KA5 538 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 SPATA9Q9BWV2 254 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 ALG2Q9H553 416 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 SUCOQ9UBS9 1254 aaKnown RBP12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 EGFL7Q9UHF1 273 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 C15orf41Q9Y2V0 281 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 CHST2Q9Y4C5 530 aa12.08□□□□□ -0.48
PDLIM7-212ENST00000504380 LIPGQ9Y5X9 500 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms