RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 SH3GL1Q99961 368 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 OMDQ99983 421 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 TMEM43Q9BTV4 400 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 LRRC61Q9BV99 259 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 CRNKL1Q9BZJ0 848 aaKnown RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 IKZF5Q9H5V7 419 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 JPT2Q9H910 190 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 APMAPQ9HDC9 416 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 SLC2A6Q9UGQ3 507 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 CRLS1Q9UJA2 301 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 SPATA2Q9UM82 520 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 RNF24Q9Y225 148 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 EIF3LQ9Y262 564 aaKnown RBP2.97□□□□□ -1.93
CALD1-224ENST00000498254 NTNG1Q9Y2I2 539 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 MEMO1Q9Y316 297 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 METP08581 1390 aa2.97□□□□□ -1.93
CALD1-224ENST00000498254 BCLAF3A2AJT9 711 aaKnown RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 OR6C65A6NJZ3 312 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 FOXI3A8MTJ6 420 aaPredicted RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 SHISA9B4DS77 424 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 NEMFO60524 1076 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 SRPX2O60687 465 aaPredicted RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 TPST2O60704 377 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 LRATO95237 230 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 STAMBPO95630 424 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 OPN1LWP04000 364 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 PVRP15151 417 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 CD9P21926 228 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 EMDP50402 254 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 CTAG1AP78358 180 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 IRX1P78414 480 aaPredicted RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 OTUD4Q01804 1114 aaKnown RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 FCHO2Q0JRZ9 810 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 CCDC173Q0VFZ6 552 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 IL18R1Q13478 541 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 LY6DQ14210 128 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 ELAVL3Q14576 367 aaKnown RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 MXD4Q14582 209 aaPredicted RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 SYCP1Q15431 976 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 CYBRD1Q53TN4 286 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 CAVIN4Q5BKX8 364 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 PHYHD1Q5SRE7 291 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 LINC00242Q5T6M2 205 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 SEL1L3Q68CR1 1132 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 DOK6Q6PKX4 331 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 EFL1Q7Z2Z2 1120 aaKnown RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 CEACAM19Q7Z692 300 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 CLEC4FQ8N1N0 589 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 BPIFB2Q8N4F0 458 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 SYT14Q8NB59 555 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 OR51G2Q8NGK0 314 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 OR5D13Q8NGL4 314 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 AKR7LQ8NHP1 331 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 FNDC8Q8TC99 324 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 GTF3AQ92664 365 aaKnown RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 EMG1Q92979 244 aaKnown RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 POM121L2Q96KW2 1035 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 TGM7Q96PF1 710 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 SLC6A7Q99884 636 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 MCRIP2Q9BUT9 160 aaKnown RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 ADNPQ9H2P0 1102 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 VCPKMTQ9H867 229 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 RRAGDQ9NQL2 400 aaPredicted RBP2.96□□□□□ -1.94
CALD1-224ENST00000498254 SLC17A5Q9NRA2 495 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 TXLNGQ9NUQ3 528 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 UFSP2Q9NUQ7 469 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 ELOVL2Q9NXB9 296 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 SPATA7Q9P0W8 599 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 CIDEBQ9UHD4 219 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 CYTH4Q9UIA0 394 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 ALG6Q9Y672 507 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 STYXL1Q9Y6J8 313 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 TMEM94Q12767 1356 aa2.96□□□□□ -1.94
CALD1-224ENST00000498254 GRIN2DO15399 1336 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 IGHV3-16A0A0C4DH30 117 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 TRBV7-9A0A0J9YWB2 115 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 LRP5LA4QPB2 252 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 SAGE2PA6NJ88 616 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 H3BMQ9 156 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 NMT2O60551 498 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 N4BP1O75113 896 aaKnown RBP2.95□□□□□ -1.94
CALD1-224ENST00000498254 ZNF254O75437 659 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 SERPINB2P05120 415 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 HBQ1P09105 142 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 UMPSP11172 480 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 RPS2P15880 293 aaKnown RBP2.95□□□□□ -1.94
CALD1-224ENST00000498254 ACADSP16219 412 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 DPEP1P16444 411 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 NCF2P19878 526 aaPredicted RBP2.95□□□□□ -1.94
CALD1-224ENST00000498254 TBXA2RP21731 343 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 HMGB2P26583 209 aaKnown RBP2.95□□□□□ -1.94
CALD1-224ENST00000498254 GRIA1P42261 906 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 LIM2P55344 173 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 ERVK11-1P61568 191 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 RPL8P62917 257 aaKnown RBP2.95□□□□□ -1.94
CALD1-224ENST00000498254 OC90Q02509 493 aaPredicted RBP2.95□□□□□ -1.94
CALD1-224ENST00000498254 GBE1Q04446 702 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 ST3GAL3Q11203 375 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 PPP1R7Q15435 360 aa2.95□□□□□ -1.94
CALD1-224ENST00000498254 EXOC3L2Q2M3D2 409 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms