RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SLC25A25Q6KCM7 469 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 SLC30A6Q6NXT4 461 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 IGFL3Q6UXB1 125 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 APOOLQ6UXV4 268 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 CYP2R1Q6VVX0 501 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 CCDC80Q76M96 950 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 RBMXL3Q8N7X1 1067 aaKnown RBP12.41□□□□□ -0.42
CPNE1-227ENST00000498056 SMYD1Q8NB12 490 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 FAM98AQ8NCA5 519 aaKnown RBP12.41□□□□□ -0.42
CPNE1-227ENST00000498056 OR2M7Q8NG81 312 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 ZG16BQ96DA0 208 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 ASB9Q96DX5 294 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 TPD52L3Q96J77 140 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 NSMCE2Q96MF7 247 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 FAM173AQ9BQD7 235 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 RTN4RQ9BZR6 473 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 MTHFD2LQ9H903 347 aaPredicted RBP12.41□□□□□ -0.42
CPNE1-227ENST00000498056 DEPPQ9NTK1 212 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 SLC13A4Q9UKG4 626 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 BOKQ9UMX3 212 aaPredicted RBP12.41□□□□□ -0.42
CPNE1-227ENST00000498056 PIEZO2Q9H5I5 2752 aa12.41□□□□□ -0.42
CPNE1-227ENST00000498056 PINLYPA6NC86 204 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 SERINC4A6NH21 518 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 M0QX08 132 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 GTPBP1O00178 669 aaKnown RBP12.4□□□□□ -0.42
CPNE1-227ENST00000498056 SNPHO15079 494 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 HCRTR2O43614 444 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 PEX1O43933 1283 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 CIB2O75838 187 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 IFNA14P01570 189 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 KDELR2P33947 212 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 CRYBA2P53672 197 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 KCNJ10P78508 379 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 PMP22Q01453 160 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 PLGLB1Q02325 96 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 ZNF117Q03924 483 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 DMTNQ08495 405 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 SNTA1Q13424 505 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 NADK2Q4G0N4 442 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 KLHL26Q53HC5 615 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 CYBRD1Q53TN4 286 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 FNDC7Q5VTL7 733 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 SLC6A19Q695T7 634 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 GLYATQ6IB77 296 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 OR5M10Q6IEU7 315 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 TMEM81Q6P7N7 255 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 Q6ZS92 163 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 EIF3MQ7L2H7 374 aaKnown RBP12.4□□□□□ -0.42
CPNE1-227ENST00000498056 PACS2Q86VP3 889 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 PTRH1Q86Y79 214 aaKnown RBP12.4□□□□□ -0.42
CPNE1-227ENST00000498056 MISPQ8IVT2 679 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 SULF2Q8IWU5 870 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 EXD3Q8N9H8 876 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 OR4K17Q8NGC6 315 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 RNF138Q8WVD3 245 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 OIT3Q8WWZ8 545 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 PMM1Q92871 262 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 ARSGQ96EG1 525 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 TMEM41AQ96HV5 264 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 LRGUKQ96M69 825 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 RNF145Q96MT1 663 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 ANGPTL4Q9BY76 406 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 TRIM15Q9C019 465 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 MUC13Q9H3R2 512 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-227ENST00000498056 ADPRHL2Q9NX46 363 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 SLC7A8Q9UHI5 535 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 B3GNT3Q9Y2A9 372 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 SLC35A3Q9Y2D2 325 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 IFT52Q9Y366 437 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 HRH3Q9Y5N1 445 aa12.4□□□□□ -0.42
CPNE1-227ENST00000498056 LRRC3CA6NJW4 275 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 FAM166BA8MTA8 275 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 KLRC4-KLRK1H3BQV0 150 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 OIP5O43482 229 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 BCAS1O75363 584 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 GCM2O75603 506 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 MFN2O95140 757 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 SNX4O95219 450 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 NUDT14O95848 222 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 CNR1P21554 472 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 PRKAR1BP31321 381 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 GAS1P54826 345 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 EEF1A1P68104 462 aaKnown RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 FLOT2Q14254 428 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 TRIM25Q14258 630 aaKnown RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 INPP5JQ15735 1006 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 FXNQ16595 210 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 GLIPR1L2Q4G1C9 344 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 COLEC12Q5KU26 742 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 ZNF771Q7L3S4 317 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 VANGL1Q8TAA9 524 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 RASSF5Q8WWW0 418 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 PROX1Q92786 737 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 RAB3IPQ96QF0 476 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 PINK1Q9BXM7 581 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 SLC25A18Q9H1K4 315 aa12.39□□□□□ -0.43
CPNE1-227ENST00000498056 MMADHCQ9H3L0 296 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-227ENST00000498056 ARMC7Q9H6L4 198 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms