RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 CYTH4Q9UIA0 394 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 STRAPQ9Y3F4 350 aaKnown RBP2.12□□□□□ -2.07
SMC4-227ENST00000497984 CDH10Q9Y6N8 788 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 GAKO14976 1311 aa2.12□□□□□ -2.07
SMC4-227ENST00000497984 PARD3Q8TEW0 1356 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 ZSCAN5BA6NJL1 495 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 KERAO60938 352 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 HLA-DPA1P20036 260 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 NMT1P30419 496 aaKnown RBP2.11□□□□□ -2.07
SMC4-227ENST00000497984 PRDX2P32119 198 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 UGT1A5P35504 534 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 GCKP35557 465 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 GNPDA1P46926 289 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 TFDP1Q14186 410 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 PDIA5Q14554 519 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 ZNF691Q5VV52 312 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 ASPHD2Q6ICH7 369 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 NEK5Q6P3R8 708 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 LRRC70Q7Z2Q7 622 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 ZSCAN4Q8NAM6 433 aaPredicted RBP2.11□□□□□ -2.07
SMC4-227ENST00000497984 CCNYQ8ND76 341 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 DNAJA4Q8WW22 397 aaPredicted RBP2.11□□□□□ -2.07
SMC4-227ENST00000497984 SPATA13Q96N96 652 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 SLC30A2Q9BRI3 323 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 CHRDL1Q9BU40 450 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 NFKBIZQ9BYH8 718 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 PPDPFQ9H3Y8 114 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 SH2D2AQ9NP31 389 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 FANCFQ9NPI8 374 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 SCML2Q9UQR0 700 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 USP16Q9Y5T5 823 aa2.11□□□□□ -2.07
SMC4-227ENST00000497984 CCDC7Q96M83 1385 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 RNF222A6NCQ9 220 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 TUBAL3A6NHL2 446 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 WASHC1A8K0Z3 465 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 ADAM12O43184 909 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 PDHBP11177 359 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 DPP4P27487 766 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 FUT7Q11130 342 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 CYB5R2Q6BCY4 276 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 OR8G2PQ6IF36 304 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 WDR74Q6RFH5 385 aaPredicted RBP2.1□□□□□ -2.07
SMC4-227ENST00000497984 ZBTB44Q8NCP5 570 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 OR52E1Q8NGJ3 308 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 BLOC1S5Q8TDH9 187 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 TMEM186Q96B77 213 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 PINX1Q96BK5 328 aaKnown RBP2.1□□□□□ -2.07
SMC4-227ENST00000497984 UPRTQ96BW1 309 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 SLC25A51Q9H1U9 297 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 GPN2Q9H9Y4 310 aaPredicted RBP2.1□□□□□ -2.07
SMC4-227ENST00000497984 LPAR2Q9HBW0 351 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 P2RX2Q9UBL9 471 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 IL19Q9UHD0 177 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 IL20RAQ9UHF4 553 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 CRLS1Q9UJA2 301 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 RIMS3Q9UJD0 308 aa2.1□□□□□ -2.07
SMC4-227ENST00000497984 LOC100131303A0A0U1RQF7 123 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 CFAP73A6NFT4 308 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 USP27XA6NNY8 438 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 SSX5O60225 188 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 SUPT7LO94864 414 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 OR8U8P0C7N1 319 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 HTR1EP28566 365 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 BDH1Q02338 343 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 GAMTQ14353 236 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 C16orf72Q14CZ0 275 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 CCDC40Q4G0X9 1142 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 C1QTNF12Q5T7M4 302 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 SLC39A4Q6P5W5 647 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 C1orf186Q6ZWK4 172 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 RABEPKQ7Z6M1 372 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 LCA5Q86VQ0 697 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 RNF148Q8N7C7 305 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 FAM71CQ8NEG0 241 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 TRUB1Q8WWH5 349 aaKnown RBP2.09□□□□□ -2.07
SMC4-227ENST00000497984 OR1E3Q8WZA6 343 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 NSMCE2Q96MF7 247 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 TMEM231Q9H6L2 316 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 SYTL2Q9HCH5 934 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 MMP26Q9NRE1 261 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 RNF6Q9Y252 685 aa2.09□□□□□ -2.07
SMC4-227ENST00000497984 SPAG9O60271 1321 aaKnown RBP2.09□□□□□ -2.08
SMC4-227ENST00000497984 PSMB11A5LHX3 300 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 LGALS8O00214 317 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 CASKO14936 926 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 STX11O75558 287 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 AKR7A3O95154 331 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 ANXA4P09525 319 aaPredicted RBP2.08□□□□□ -2.08
SMC4-227ENST00000497984 ZCCHC18P0CG32 403 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 UQCRBP14927 111 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 XRCC1P18887 633 aaPredicted RBP2.08□□□□□ -2.08
SMC4-227ENST00000497984 TSPAN8P19075 237 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 SFNP31947 248 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 RBMXP38159 391 aaKnown RBP2.08□□□□□ -2.08
SMC4-227ENST00000497984 NOVA1P51513 510 aaKnown RBP2.08□□□□□ -2.08
SMC4-227ENST00000497984 LIM2P55344 173 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 OSTNP61366 133 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 CBX3Q13185 183 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 SYPL1Q16563 259 aa2.08□□□□□ -2.08
SMC4-227ENST00000497984 SCYL2Q6P3W7 929 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms