RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 CCDC121Q6ZUS5 278 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 KRT73Q86Y46 540 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 SLC30A8Q8IWU4 369 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 TMCO5AQ8N6Q1 288 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 WDSUB1Q8N9V3 476 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 LSM14AQ8ND56 463 aaKnown RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 OR4K17Q8NGC6 315 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 FIG4Q92562 907 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 ARSGQ96EG1 525 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 TMEM41AQ96HV5 264 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 DSN1Q9H410 356 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 MED11Q9P086 117 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 SUCOQ9UBS9 1254 aaKnown RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 EGFL7Q9UHF1 273 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 ZNF443Q9Y2A4 671 aaPredicted RBP10.86□□□□□ -0.67
CUX1-210ENST00000497815 CARD8Q9Y2G2 431 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 NTNG1Q9Y2I2 539 aa10.86□□□□□ -0.67
CUX1-210ENST00000497815 NBEAQ8NFP9 2946 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 M0QX08 132 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ACOT7O00154 380 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 TFECO14948 347 aaPredicted RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 SNPHO15079 494 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 HCRTR2O43614 444 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 BCAS1O75363 584 aaPredicted RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 GCM2O75603 506 aaPredicted RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 TRAPPC6AO75865 159 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 PDE5AO76074 875 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 CSTAP01040 98 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 PABPC4LP0CB38 370 aaKnown RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 UBTFL6P0CB48 400 aaPredicted RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 UBL4AP11441 157 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ETS2P15036 469 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 NCK1P16333 377 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ZNF24P17028 368 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 RPS4Y1P22090 263 aaKnown RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 GDF1P27539 372 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 MAGEA5P43359 124 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 CCR4P51679 360 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 MLLT10P55197 1068 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 KCNJ10P78508 379 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ALDH6A1Q02252 535 aaKnown RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 ZNF117Q03924 483 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 CEACAM7Q14002 265 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 FGFBP1Q14512 234 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 LARS2Q15031 903 aaKnown RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 INAQ16352 499 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 LIN52Q52LA3 116 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 LRRC23Q53EV4 343 aaPredicted RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 RNFT1Q5M7Z0 435 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 SAMD4BQ5PRF9 694 aaKnown RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 MRPL2Q5T653 305 aaKnown RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 INTS11Q5TA45 600 aaKnown RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 ZNF836Q6ZNA1 936 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 EIF3MQ7L2H7 374 aaKnown RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 PLCZ1Q86YW0 608 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ARMC8Q8IUR7 673 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 TMEM251Q8N6I4 163 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 SMYD1Q8NB12 490 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ZFP62Q8NB50 900 aaPredicted RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 OR2M3Q8NG83 312 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 SLC7A6OSQ96CW6 309 aaPredicted RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 NTNG2Q96CW9 530 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ZNF607Q96SK3 696 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 SPATA5L1Q9BVQ7 753 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 C1orf21Q9H246 121 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 RLIMQ9NVW2 624 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 B4GALT7Q9UBV7 327 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 SEC14L3Q9UDX4 400 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ANAPC2Q9UJX6 822 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 FBXL2Q9UKC9 423 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 ZNF232Q9UNY5 417 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 C15orf41Q9Y2V0 281 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 GPC6Q9Y625 555 aaPredicted RBP10.85□□□□□ -0.67
CUX1-210ENST00000497815 EPG5Q9HCE0 2579 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 CACNA1BQ00975 2339 aa10.85□□□□□ -0.67
CUX1-210ENST00000497815 EIF4E1BA6NMX2 242 aaKnown RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 B4DXG7 233 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 NPIPA5E9PKD4 350 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 CXCR6O00574 342 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 ZNF264O43296 627 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 TPST1O60507 370 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 CDC40O60508 579 aaKnown RBP eCLIP10.84□□□□□ -0.67
CUX1-210ENST00000497815 DNAJA2O60884 412 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 SERPINB7O75635 380 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 ATP5HO75947 161 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 PDE9AO76083 593 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 GLSO94925 669 aaPredicted RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 NUDT14O95848 222 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 CRYABP02511 175 aaKnown RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 CELA3AP09093 270 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 NID1P14543 1247 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 ELAVL4P26378 380 aaKnown RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 PCBP3P57721 371 aaKnown RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 DMTNQ08495 405 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 VEZF1Q14119 521 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 DNAL1Q4LDG9 190 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 SOWAHCQ53LP3 525 aaPredicted RBP10.84□□□□□ -0.67
CUX1-210ENST00000497815 AP1ARQ63HQ0 302 aa10.84□□□□□ -0.67
CUX1-210ENST00000497815 CBLN3Q6UW01 205 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms