RNA–Protein interactions for RNA: ENST00000497345.1

CMSS1-209, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-209ENST00000497345 RAC3P60763 192 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 RPS18P62269 152 aaKnown RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 POU6F2P78424 691 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 E2F1Q01094 437 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 MC2RQ01718 297 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 SPIBQ01892 262 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 RHAGQ02094 409 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 FUT5Q11128 374 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 TOP3AQ13472 1001 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 TRA2AQ13595 282 aaKnown RBP eCLIP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 VEZF1Q14119 521 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 SERTAD2Q14140 314 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 GANABQ14697 944 aaKnown RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ZNHIT3Q15649 155 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 MAPK11Q15759 364 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ISXQ2M1V0 245 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ZIK1Q3SY52 487 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 IFI44LQ53G44 452 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF311Q5JNZ3 666 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 C6orf52Q5T4I8 152 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 DCAF12Q5T6F0 453 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 INTS11Q5TA45 600 aaKnown RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 FHL5Q5TD97 284 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 RHBDD2Q6NTF9 364 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 NIPAL1Q6NVV3 410 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 TBPL2Q6SJ96 375 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ZBTB49Q6ZSB9 765 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 EIF3MQ7L2H7 374 aaKnown RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 OVCH1Q7RTY7 1134 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ANKRD37Q7Z713 158 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 GALNT5Q7Z7M9 940 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 TMEM179BQ7Z7N9 219 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 PATL1Q86TB9 770 aaKnown RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 MEX3DQ86XN8 651 aaKnown RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 RBM45Q8IUH3 476 aaKnown RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ST13P4Q8IZP2 240 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 OR2L13Q8N349 312 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 CBR4Q8N4T8 237 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 GATSQ8NAP1 163 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 OR5M3Q8NGP4 307 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 PSMA8Q8TAA3 256 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 MAGEE2Q8TD90 523 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ADAMTS18Q8TE60 1221 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 PTPMT1Q8WUK0 201 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 METTL21AQ8WXB1 218 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 LZICQ8WZA0 190 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 PROX1Q92786 737 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 FBXW5Q969U6 566 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 TMBIM1Q969X1 311 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 MOAP1Q96BY2 351 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 EFHD2Q96C19 240 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ZG16BQ96DA0 208 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 GIMAP5Q96F15 307 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF764Q96H86 408 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 SENP5Q96HI0 755 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ADOQ96SZ5 270 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 BARD1Q99728 777 aaKnown RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 SLC29A1Q99808 456 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 TREX2Q9BQ50 279 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 CRB3Q9BUF7 120 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ITPAQ9BY32 194 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 CHRNA10Q9GZZ6 450 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 OR10A5Q9H207 317 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 TMEM38AQ9H6F2 299 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 CXorf21Q9HAI6 301 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 SMURF2Q9HAU4 748 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 MKKSQ9NPJ1 570 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 EXD2Q9NVH0 621 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 RLIMQ9NVW2 624 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 VNN3Q9NY84 501 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 FLRT3Q9NZU0 649 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 FOXJ2Q9P0K8 574 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 C6orf203Q9P0P8 240 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 PTGFRNQ9P2B2 879 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 SEC14L3Q9UDX4 400 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 RIMS3Q9UJD0 308 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 C19orf53Q9UNZ5 99 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 SAMD4AQ9UPU9 718 aaKnown RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 SATB2Q9UPW6 733 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 NTNG1Q9Y2I2 539 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 HEMK1Q9Y5R4 338 aaPredicted RBP4.4□□□□□ -1.71
CMSS1-209ENST00000497345 ZNF318Q5VUA4 2279 aa4.4□□□□□ -1.71
CMSS1-209ENST00000497345 CENPVL1A0A0U1RR11 272 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 PRAMEF25A6NGN4 478 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 IDSB3KWA1 339 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 B4E171 279 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 C9J4A7 227 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 WWP2O00308 870 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 PLOD2O00469 737 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 PEX12O00623 359 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 PEX1O43933 1283 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 HS6ST1O60243 411 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 PLOD3O60568 738 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 PRAMEF2O60811 474 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 MITFO75030 526 aaPredicted RBP4.39□□□□□ -1.71
CMSS1-209ENST00000497345 COQ9O75208 318 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 REM1O75628 298 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 SERPINB7O75635 380 aa4.39□□□□□ -1.71
CMSS1-209ENST00000497345 PDE9AO76083 593 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms