RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ZNF226Q9NYT6 803 aa6.43□□□□□ -1.38
USP39-219ENST00000496047 COPS7AQ9UBW8 275 aa6.43□□□□□ -1.38
USP39-219ENST00000496047 KLHL3Q9UH77 587 aa6.43□□□□□ -1.38
USP39-219ENST00000496047 SLC7A7Q9UM01 511 aa6.43□□□□□ -1.38
USP39-219ENST00000496047 BAIAP2Q9UQB8 552 aa6.43□□□□□ -1.38
USP39-219ENST00000496047 SLC35A3Q9Y2D2 325 aa6.43□□□□□ -1.38
USP39-219ENST00000496047 MRPS2Q9Y399 296 aaKnown RBP6.43□□□□□ -1.38
USP39-219ENST00000496047 EXOSC1Q9Y3B2 195 aaKnown RBP6.43□□□□□ -1.38
USP39-219ENST00000496047 MED31Q9Y3C7 131 aa6.43□□□□□ -1.38
USP39-219ENST00000496047 HEMK1Q9Y5R4 338 aaPredicted RBP6.43□□□□□ -1.38
USP39-219ENST00000496047 MN1Q10571 1320 aaPredicted RBP6.43□□□□□ -1.38
USP39-219ENST00000496047 ZFHX2Q9C0A1 2572 aaPredicted RBP6.43□□□□□ -1.38
USP39-219ENST00000496047 PTPRZ1P23471 2315 aaPredicted RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 SETXQ7Z333 2677 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 A0A087WUU8 490 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 A0A1W2PPW3 197 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 A0A1W2PS29 197 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 SLC35F4A4IF30 521 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 HTR3EA5X5Y0 456 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 UNC119BA6NIH7 251 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 EFCAB9A8MZ26 197 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 FAM227AF5H4B4 570 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 DSCR3O14972 297 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 PRODHO43272 600 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 CHP2O43745 196 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 AIREO43918 545 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 HCN1O60741 890 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 CLPXO76031 633 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 HTR1AP08908 422 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 HBQ1P09105 142 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 ADORA3P0DMS8 318 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 PNLIPP16233 465 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 ENDOUP21128 410 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 PAICSP22234 425 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 EPHA2P29317 976 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 HOXA6P31267 233 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 RORAP35398 523 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 RBM34P42696 430 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 MAP2K4P45985 399 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 FNTBP49356 437 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 CSNK1EP49674 416 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 PGDP52209 483 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 NUDT6P53370 316 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 GP2P55259 537 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 GFERP55789 205 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 DCAF7P61962 342 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 EEF1A1P68104 462 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 RHAGQ02094 409 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 ACY1Q03154 408 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 ZP2Q05996 745 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 PIGFQ07326 219 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 FZD5Q13467 585 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 ZNF267Q14586 743 aaPredicted RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 GINS1Q14691 196 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 ZNF846Q147U1 533 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 EXOSC7Q15024 291 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 SEC23BQ15437 767 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 NR0B2Q15466 257 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 MED22Q15528 200 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 SMN1Q16637 294 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 MOGQ16653 247 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 AMZ1Q400G9 498 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 CCNJQ5T5M9 372 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 ARHGAP40Q5TG30 622 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 PLAG1Q6DJT9 500 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 LAIR2Q6ISS4 152 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 QSOX2Q6ZRP7 698 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 DGLUCYQ7Z3D6 616 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 GDF7Q7Z4P5 450 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 SLCO6A1Q86UG4 719 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 WDR5BQ86VZ2 330 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 RBM45Q8IUH3 476 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 GRAMD2AQ8IUY3 354 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 AMER2Q8N7J2 671 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 FRMD1Q8N878 549 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 TCEANCQ8N8B7 351 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 MORN4Q8NDC4 146 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 B3GNT7Q8NFL0 401 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 OR2T33Q8NG76 320 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 OR4D11Q8NGI4 311 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 OR51Q1Q8NH59 317 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 TMEM163Q8TC26 289 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 FANK1Q8TC84 345 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 PIK3R3Q92569 461 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 DAZLQ92904 295 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 NAT6Q93015 286 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 ZHX1-C8orf76Q96EF9 292 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 MRPL48Q96GC5 212 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 FAM46AQ96IP4 442 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 ELF4Q99607 663 aaPredicted RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 FUZQ9BT04 418 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 TSSK6Q9BXA6 273 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 CDCA4Q9BXL8 241 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 QRSL1Q9H0R6 528 aaKnown RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 SYNPO2LQ9H987 977 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 MKKSQ9NPJ1 570 aaPredicted RBP6.42□□□□□ -1.38
USP39-219ENST00000496047 CTPS2Q9NRF8 586 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 SEMA4GQ9NTN9 838 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 FKBP14Q9NWM8 211 aa6.42□□□□□ -1.38
USP39-219ENST00000496047 TVP23BQ9NYZ1 205 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms