RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 SLC6A18Q96N87 628 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 APOOQ9BUR5 198 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 KATNB1Q9BVA0 655 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 HCAR1Q9BXC0 346 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 PBX4Q9BYU1 374 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 TMEM27Q9HBJ8 222 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 CYP8B1Q9UNU6 501 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 PPIL1Q9Y3C6 166 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 CHST2Q9Y4C5 530 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 REV3LO60673 3130 aa12.56□□□□□ -0.4
GPC1-209ENST00000495100 TVP23AA6NH52 213 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 GABRPO00591 440 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 IMPA2O14732 288 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 UBXN7O94888 489 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 NDUFV2P19404 249 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 USP53Q70EK8 1073 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 TMPRSS9Q7Z410 1059 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 CHCHD4Q8N4Q1 142 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 YIPF7Q8N8F6 280 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 VWCEQ96DN2 955 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 OR8D2Q9GZM6 311 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 MTIF3Q9H2K0 278 aaKnown RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 LHX9Q9NQ69 397 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 MRPL39Q9NYK5 338 aaKnown RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 ICKQ9UPZ9 632 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 NAALAD2Q9Y3Q0 740 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 IGKV1-8A0A0C4DH67 115 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 INMT-MINDY4F8WBC2 141 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 PRODHO43272 600 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 PAPLNO95428 1278 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 PTTG1O95997 202 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 TEAD1P28347 426 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 CRMP1Q14194 572 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 MAPK14Q16539 360 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 SLX4IPQ5VYV7 408 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 FAAP20Q6NZ36 180 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 RANBP3LQ86VV4 465 aaPredicted RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 OR8H3Q8N146 312 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 ASCC1Q8N9N2 400 aaKnown RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 RFKQ969G6 155 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 ZNF707Q96C28 371 aaPredicted RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 TOX2Q96NM4 488 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 OR2M4Q96R27 311 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 TNFRSF13CQ96RJ3 184 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 NRSN2Q9GZP1 204 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 SYNPO2LQ9H987 977 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 ING1Q9UK53 422 aaPredicted RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 CDV3Q9UKY7 258 aaKnown RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 ACOD1A6NK06 481 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 GATBO75879 557 aaKnown RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 SEMA3DO95025 777 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 TBX6O95947 436 aaPredicted RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 HLA-DPB1P04440 258 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 PRPH2P23942 346 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 HTR2BP41595 481 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 EIF4HQ15056 248 aaKnown RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 GDF7Q7Z4P5 450 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 NRROSQ86YC3 692 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 LRRC17Q8N6Y2 441 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 PROKR2Q8NFJ6 384 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 PRRC1Q96M27 445 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 ELF4Q99607 663 aaPredicted RBP12.55□□□□□ -0.4
GPC1-209ENST00000495100 PCBD2Q9H0N5 130 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 DKK3Q9UBP4 350 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 ACSL5Q9ULC5 683 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 GPR34Q9UPC5 381 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 PCDHGB1Q9Y5G3 927 aa12.55□□□□□ -0.4
GPC1-209ENST00000495100 E9PI62 339 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 GTPBP1O00178 669 aaKnown RBP12.54□□□□□ -0.4
GPC1-209ENST00000495100 RLN1P04808 185 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 CTSBP07858 339 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 BMP8BP34820 402 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 CRYBB2P43320 205 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 GNA13Q14344 377 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 ZNF776Q68DI1 518 aaPredicted RBP12.54□□□□□ -0.4
GPC1-209ENST00000495100 FIGLAQ6QHK4 219 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 BMP8AQ7Z5Y6 402 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 ACBD7Q8N6N7 88 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 NANOGP1Q8N7R0 232 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 TP53I13Q8NBR0 393 aaPredicted RBP12.54□□□□□ -0.4
GPC1-209ENST00000495100 OR56A1Q8NGH5 318 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 OR4Q3Q8NH05 313 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 ZNF563Q8TA94 476 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 TBC1D20Q96BZ9 403 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 REV1Q9UBZ9 1251 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 MAN2B1O00754 1011 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 CELA2BP08218 269 aaPredicted RBP12.54□□□□□ -0.4
GPC1-209ENST00000495100 CSF3P09919 207 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 MYF5P13349 255 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 HNRNPFP52597 415 aaKnown RBP12.54□□□□□ -0.4
GPC1-209ENST00000495100 PCBP3P57721 371 aaKnown RBP12.54□□□□□ -0.4
GPC1-209ENST00000495100 TMEM240Q5SV17 173 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 LNX2Q8N448 690 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 SIRT6Q8N6T7 355 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 CNOT9Q92600 299 aaKnown RBP12.54□□□□□ -0.4
GPC1-209ENST00000495100 HHIPL1Q96JK4 782 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 OR2A14Q96R47 310 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 MED28Q9H204 178 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 TBC1D24Q9ULP9 559 aa12.54□□□□□ -0.4
GPC1-209ENST00000495100 LILRB5O75023 590 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms