RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ACAD8Q9UKU7 415 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 SLC5A6Q9Y289 635 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 CAPN7Q9Y6W3 813 aa12.3□□□□□ -0.44
COL1A1-208ENST00000494334 NCKAP5O14513 1909 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 ZNF407Q9C0G0 2248 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 C15orf38-AP3S2A0A0A6YYH1 394 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 SERINC4A6NH21 518 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 H3BNH8 94 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 BCKDKO14874 412 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 OIP5O43482 229 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 TNFRSF21O75509 655 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 BMP7P18075 431 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 GPX2P18283 190 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 HK1P19367 917 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 PPIBP23284 216 aaKnown RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 CASP6P55212 293 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 GFRA1P56159 465 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 ZNF117Q03924 483 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 CRYZQ08257 329 aaKnown RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 NFYCQ13952 458 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 CYLC2Q14093 348 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 GANABQ14697 944 aaKnown RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 ZNF630Q2M218 657 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 COQ5Q5HYK3 327 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 VASNQ6EMK4 673 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 CBLN3Q6UW01 205 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 PIGWQ7Z7B1 504 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 HMGN2P46Q86SG4 172 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 SNX32Q86XE0 403 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 OR5M9Q8NGP3 310 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 B4GALNT2Q8NHY0 566 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 SLC38A5Q8WUX1 472 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 OIT3Q8WWZ8 545 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 C1GALT1C1Q96EU7 318 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 SH3YL1Q96HL8 342 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 ANKRD27Q96NW4 1050 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 TIMP4Q99727 224 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 KLHDC3Q9BQ90 382 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 CPPED1Q9BRF8 314 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 UGT2B28Q9BY64 529 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 QRSL1Q9H0R6 528 aaKnown RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 MTHFD2LQ9H903 347 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 PNPLA3Q9NST1 481 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 CARD8Q9Y2G2 431 aa12.29□□□□□ -0.44
COL1A1-208ENST00000494334 RPH3AQ9Y2J0 694 aaPredicted RBP12.29□□□□□ -0.44
COL1A1-208ENST00000494334 BBIP1A8MTZ0 92 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 EVPLLA8MZ36 301 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 GTPBP1O00178 669 aaKnown RBP12.28□□□□□ -0.44
COL1A1-208ENST00000494334 CCL21O00585 134 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 HCRTR2O43614 444 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 AGFG2O95081 481 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 BCHEP06276 602 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 TCEA1P23193 301 aaKnown RBP12.28□□□□□ -0.44
COL1A1-208ENST00000494334 ADH7P40394 386 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 CRISP3P54108 245 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 B3GALT5-AS1P59052 145 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 SELPLGQ14242 412 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 CAPRIN1Q14444 709 aaKnown RBP12.28□□□□□ -0.44
COL1A1-208ENST00000494334 FGFBP1Q14512 234 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 NDUFAF6Q330K2 333 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 MMEL1Q495T6 779 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 DCST1Q5T197 706 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 WLSQ5T9L3 541 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 REP15Q6BDI9 236 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 ARSKQ6UWY0 536 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 C3P1Q6ZMU1 363 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 IFNEQ86WN2 208 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 RP9Q8TA86 221 aaKnown RBP12.28□□□□□ -0.44
COL1A1-208ENST00000494334 ABTB1Q969K4 478 aaPredicted RBP12.28□□□□□ -0.44
COL1A1-208ENST00000494334 MAL2Q969L2 176 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 TMEM19Q96HH6 336 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 TRIM8Q9BZR9 551 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 MYLK2Q9H1R3 596 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 A4GALTQ9NPC4 353 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 CALML5Q9NZT1 146 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 SUCOQ9UBS9 1254 aaKnown RBP12.28□□□□□ -0.44
COL1A1-208ENST00000494334 ICAM5Q9UMF0 924 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 CORO2BQ9UQ03 480 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
COL1A1-208ENST00000494334 PRRC2CQ9Y520 2896 aaKnown RBP12.28□□□□□ -0.44
COL1A1-208ENST00000494334 DNAJC13O75165 2243 aa12.27□□□□□ -0.44
COL1A1-208ENST00000494334 HELZ2Q9BYK8 2649 aaKnown RBP12.27□□□□□ -0.44
COL1A1-208ENST00000494334 TMEM247A6NEH6 219 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 AGAP5A6NIR3 686 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 MRASO14807 208 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF264O43296 627 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 EIF4E2O60573 245 aaKnown RBP12.27□□□□□ -0.45
COL1A1-208ENST00000494334 ACTL6AO96019 429 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 PGM1P36871 562 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 STARP49675 285 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 P2RX1P51575 399 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 MTPNP58546 118 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 KCNJ10P78508 379 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 TRMT5Q32P41 509 aaKnown RBP12.27□□□□□ -0.45
COL1A1-208ENST00000494334 GLYR1Q49A26 553 aaPredicted RBP12.27□□□□□ -0.45
COL1A1-208ENST00000494334 RPS26P11Q5JNZ5 115 aaPredicted RBP12.27□□□□□ -0.45
COL1A1-208ENST00000494334 GCNT6Q5T4J0 391 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 ZNF585AQ6P3V2 769 aa12.27□□□□□ -0.45
COL1A1-208ENST00000494334 TREML1Q86YW5 311 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms